Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12370 and 12371 are separated by 390 nucleotides12371 and 12372 are separated by 831 nucleotides12372 and 12373 are separated by 581 nucleotides12373 and 12374 are separated by 421 nucleotides mRNA_4002: 12370 - KOG4089 Predicted mitochondrial ribosomal protein L23, at 1,122,500 to 1,123,489 12370 mRNA_4003: 12371 - K13667 RUMI, KTELC1 protein glucosyltransferase, at 1,123,880 to 1,126,136 12371 mRNA_4004: 12372 - KOG1341 Na+/K+ transporter, at 1,126,968 to 1,131,164 12372 mRNA_4005: 12373 - HMMPfam-bZIP transcription factor-PF00170,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 1,131,746 to 1,132,749 12373 mRNA_4006: 12374 - Hypothetical Protein, at 1,133,171 to 1,133,679 12374
Group Condition mRNA_4002 mRNA_4003 mRNA_4004 mRNA_4005 mRNA_4006
12370 12371 12372 12373 12374
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.2 -0.6 -0.7 -0.4
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.2 -0.6 -0.5 +0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 -0.1 -1.0 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.6 -2.4 +0.6 +0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.1 -0.2 -0.2 +0.0
ypd buoyancy 40 hrs High Buoyancy N.D. +0.0 -0.3 -0.4 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.2 -1.2 +0.6 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.0 -1.0 +1.1 +0.1
growth on ypd YPD N.D. +0.3 -0.3 +0.2 +0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.2 -0.1 +0.5 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.3 -0.8 +1.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.1 -0.3 +1.0 -0.1
auxotrophy YNB Glucose N.D. +0.3 -0.4 +0.6 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.2 -0.3 +0.6 +0.0
growth on ricinoleic acid YNB Glucose N.D. +0.2 -0.3 +0.5 +0.2
growth on oleic acid YNB Glucose N.D. +0.2 -0.1 +0.5 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.3 -0.3 +0.6 +0.3
auxotrophy YNB Glucose 75mM Methionine N.D. +0.5 -0.3 +0.4 +0.1
growth on oleic acid YNB Oleic Acid N.D. +0.2 -0.6 +1.2 +0.2
auxotrophy Dropout Complete N.D. +0.4 -0.1 +0.6 +0.3
auxotrophy YNB Glucose 75mM Arginine N.D. +0.3 -0.4 +1.0 +0.2
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