Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
12371 and 12372 are separated by 831 nucleotides
12372 and 12373 are separated by 581 nucleotides
12373 and 12374 are separated by 421 nucleotides
12374 and 12375 are separated by 251 nucleotides
mRNA_4003: 12371 - K13667 RUMI, KTELC1 protein glucosyltransferase, at 1,123,880 to 1,126,136
12371
mRNA_4004: 12372 - KOG1341 Na+/K+ transporter, at 1,126,968 to 1,131,164
12372
mRNA_4005: 12373 - HMMPfam-bZIP transcription factor-PF00170,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 1,131,746 to 1,132,749
12373
mRNA_4006: 12374 - Hypothetical Protein, at 1,133,171 to 1,133,679
12374
mRNA_4007: 12375 - K12373 HEXA_B hexosaminidase, at 1,133,931 to 1,136,432
12375
Group
Condition
mRNA
_4003
mRNA
_4004
mRNA
_4005
mRNA
_4006
mRNA
_4007
12371
12372
12373
12374
12375
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
-0.6
-0.7
-0.4
-0.7
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.1
-1.0
+0.1
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-0.6
-0.5
+0.1
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.6
-2.4
+0.6
+0.2
+0.3
ypd buoyancy
40 hrs High Buoyancy
+0.0
-0.3
-0.4
+0.2
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.2
-0.2
+0.0
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
-1.0
+1.1
+0.1
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
-1.2
+0.6
+0.1
+0.3
growth on ypd
YPD
+0.3
-0.3
+0.2
+0.1
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.1
+0.5
+0.1
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
-0.3
+1.0
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
-0.3
+0.6
+0.0
-0.2
auxotrophy
YNB Glucose
+0.3
-0.4
+0.6
+0.1
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
-0.8
+1.2
-0.1
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.5
-0.3
+0.4
+0.1
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
-0.3
+0.6
+0.3
+0.1
growth on oleic acid
YNB Glucose
+0.2
-0.1
+0.5
+0.2
+0.2
growth on ricinoleic acid
YNB Glucose
+0.2
-0.3
+0.5
+0.2
+0.4
auxotrophy
YNB Glucose 75mM Arginine
+0.3
-0.4
+1.0
+0.2
+0.0
auxotrophy
Dropout Complete
+0.4
-0.1
+0.6
+0.3
+0.1
growth on oleic acid
YNB Oleic Acid
+0.2
-0.6
+1.2
+0.2
+0.3
remove
mRNA_4003
plot
remove
mRNA_4004
plot
remove
mRNA_4005
remove
mRNA_4006
plot
remove
mRNA_4007
plot