Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12371 and 12372 are separated by 831 nucleotides12372 and 12373 are separated by 581 nucleotides12373 and 12374 are separated by 421 nucleotides12374 and 12375 are separated by 251 nucleotides mRNA_4003: 12371 - K13667 RUMI, KTELC1 protein glucosyltransferase, at 1,123,880 to 1,126,136 12371 mRNA_4004: 12372 - KOG1341 Na+/K+ transporter, at 1,126,968 to 1,131,164 12372 mRNA_4005: 12373 - HMMPfam-bZIP transcription factor-PF00170,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 1,131,746 to 1,132,749 12373 mRNA_4006: 12374 - Hypothetical Protein, at 1,133,171 to 1,133,679 12374 mRNA_4007: 12375 - K12373 HEXA_B hexosaminidase, at 1,133,931 to 1,136,432 12375
Group Condition mRNA_4003 mRNA_4004 mRNA_4005 mRNA_4006 mRNA_4007
12371 12372 12373 12374 12375
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.6 -0.7 -0.4 -0.7
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 -1.0 +0.1 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.6 -0.5 +0.1 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.6 -2.4 +0.6 +0.2 +0.3
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.3 -0.4 +0.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.2 -0.2 +0.0 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -1.0 +1.1 +0.1 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -1.2 +0.6 +0.1 +0.3
growth on ypd YPD +0.3 -0.3 +0.2 +0.1 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.1 +0.5 +0.1 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.3 +1.0 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.3 +0.6 +0.0 -0.2
auxotrophy YNB Glucose +0.3 -0.4 +0.6 +0.1 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 -0.8 +1.2 -0.1 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.5 -0.3 +0.4 +0.1 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.3 +0.6 +0.3 +0.1
growth on oleic acid YNB Glucose +0.2 -0.1 +0.5 +0.2 +0.2
growth on ricinoleic acid YNB Glucose +0.2 -0.3 +0.5 +0.2 +0.4
auxotrophy YNB Glucose 75mM Arginine +0.3 -0.4 +1.0 +0.2 +0.0
auxotrophy Dropout Complete +0.4 -0.1 +0.6 +0.3 +0.1
growth on oleic acid YNB Oleic Acid +0.2 -0.6 +1.2 +0.2 +0.3
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