Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12372 and 12373 are separated by 581 nucleotides12373 and 12374 are separated by 421 nucleotides12374 and 12375 are separated by 251 nucleotides12375 and 12376 are separated by 300 nucleotides mRNA_4004: 12372 - KOG1341 Na+/K+ transporter, at 1,126,968 to 1,131,164 12372 mRNA_4005: 12373 - HMMPfam-bZIP transcription factor-PF00170,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 1,131,746 to 1,132,749 12373 mRNA_4006: 12374 - Hypothetical Protein, at 1,133,171 to 1,133,679 12374 mRNA_4007: 12375 - K12373 HEXA_B hexosaminidase, at 1,133,931 to 1,136,432 12375 mRNA_4008: 12376 - K03695 clpB ATP-dependent Clp protease ATP-binding subunit ClpB, at 1,136,733 to 1,139,810 12376
Group Condition mRNA_4004 mRNA_4005 mRNA_4006 mRNA_4007 mRNA_4008
12372 12373 12374 12375 12376
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 -0.7 -0.4 -0.7 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid -2.4 +0.6 +0.2 +0.3 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 -1.0 +0.1 -0.2 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.6 -0.5 +0.1 -0.0 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.4 +0.2 -0.1 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -1.2 +0.6 +0.1 +0.3 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.2 +0.0 -0.0 -0.1
growth on ypd YPD -0.3 +0.2 +0.1 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 +1.0 -0.1 -0.1 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 +0.6 +0.0 -0.2 -0.1
auxotrophy YNB Glucose -0.4 +0.6 +0.1 +0.0 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -1.0 +1.1 +0.1 -0.4 +0.5
auxotrophy YNB Glucose 75mM Methionine -0.3 +0.4 +0.1 +0.0 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.8 +1.2 -0.1 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 +0.6 +0.3 +0.1 -0.1
growth on oleic acid YNB Glucose -0.1 +0.5 +0.2 +0.2 -0.1
growth on ricinoleic acid YNB Glucose -0.3 +0.5 +0.2 +0.4 -0.1
auxotrophy Dropout Complete -0.1 +0.6 +0.3 +0.1 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.5 +0.1 +0.0 +0.4
auxotrophy YNB Glucose 75mM Arginine -0.4 +1.0 +0.2 +0.0 +0.2
growth on oleic acid YNB Oleic Acid -0.6 +1.2 +0.2 +0.3 -0.0
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