Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12392 and 12393 are separated by 761 nucleotides12393 and 12394 are separated by 138 nucleotides12394 and 12395 are separated by 551 nucleotides12395 and 12396 are separated by 585 nucleotides mRNA_4024: 12392 - HMMPfam-Nuclear fragile X mental retardation-interacting protein 1 (NUFIP1)-PF10453,ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103,SMART-zinc finger-SM00356, at 1,183,513 to 1,185,147 12392 mRNA_4025: 12393 - K15634 gpmB probable phosphoglycerate mutase, at 1,185,909 to 1,186,748 12393 mRNA_4026: 12394 - HMMPfam-Cyclin-PF08613, at 1,186,887 to 1,188,212 12394 mRNA_4027: 12395 - K12863 CWC15 protein CWC15, at 1,188,764 to 1,189,753 12395 mRNA_4028: 12396 - K02328 POLD2 DNA polymerase delta subunit 2, at 1,190,339 to 1,192,414 12396
Group Condition mRNA_4024 mRNA_4025 mRNA_4026 mRNA_4027 mRNA_4028
12392 12393 12394 12395 12396
growth on ricinoleic acid YNB Glucose N.D. -0.4 N.D. N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.3 N.D. N.D. N.D.
growth on oleic acid YNB Oleic Acid N.D. -0.3 N.D. N.D. N.D.
auxotrophy YNB Glucose N.D. -0.2 N.D. N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. -0.1 N.D. N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.1 N.D. N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.1 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. -0.1 N.D. N.D. N.D.
growth on oleic acid YNB Glucose N.D. -0.1 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. -0.1 N.D. N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.0 N.D. N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.0 N.D. N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.1 N.D. N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.1 N.D. N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.2 N.D. N.D. N.D.
auxotrophy Dropout Complete N.D. +0.2 N.D. N.D. N.D.
growth on ypd YPD N.D. +0.2 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.3 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.5 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.5 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.5 N.D. N.D. N.D.
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