Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
12396 and 12397 are separated by 182 nucleotides
12397 and 12398 are separated by 451 nucleotides
12398 and 12399 are separated by 466 nucleotides
12399 and 12400 are separated by 2682 nucleotides
mRNA_4028: 12396 - K02328 POLD2 DNA polymerase delta subunit 2, at 1,190,339 to 1,192,414
12396
mRNA_4029: 12397 - HMMPfam-DASH complex subunit Hsk3 like-PF08227, at 1,192,597 to 1,192,970
12397
mRNA_4030: 12398 - Hypothetical Protein, at 1,193,422 to 1,193,864
12398
mRNA_4031: 12399 - K08726 EPHX2 soluble epoxide hydrolase / lipid-phosphate phosphatase, at 1,194,331 to 1,195,759
12399
mRNA_4032: 12400 - Hypothetical Protein, at 1,198,442 to 1,200,513
12400
Group
Condition
mRNA
_4028
mRNA
_4029
mRNA
_4030
mRNA
_4031
mRNA
_4032
12396
12397
12398
12399
12400
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
N.D.
N.D.
-0.7
-1.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
N.D.
N.D.
-0.1
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
N.D.
N.D.
-0.2
+0.2
growth on ricinoleic acid
YNB Glucose
N.D.
N.D.
N.D.
-0.1
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
N.D.
N.D.
+0.2
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
N.D.
N.D.
+0.1
-0.1
ypd buoyancy
40 hrs Low Buoyancy
N.D.
N.D.
N.D.
-0.0
+0.1
growth on oleic acid
YNB Glucose
N.D.
N.D.
N.D.
+0.3
-0.2
growth on oleic acid
YNB Oleic Acid
N.D.
N.D.
N.D.
+0.2
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
N.D.
N.D.
+0.2
-0.1
ypd buoyancy
40 hrs High Buoyancy
N.D.
N.D.
N.D.
+0.1
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
N.D.
N.D.
+0.1
+0.2
auxotrophy
YNB Glucose 75mM Methionine
N.D.
N.D.
N.D.
+0.3
+0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
N.D.
N.D.
-0.1
+0.3
auxotrophy
YNB Glucose 75mM Arginine
N.D.
N.D.
N.D.
+0.2
+0.1
auxotrophy
Dropout Complete
N.D.
N.D.
N.D.
+0.1
+0.3
ypd buoyancy
40 hrs Median Buoyancy
N.D.
N.D.
N.D.
+0.2
+0.2
auxotrophy
YNB Glucose
N.D.
N.D.
N.D.
+0.3
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
N.D.
N.D.
+0.2
+0.3
growth on ypd
YPD
N.D.
N.D.
N.D.
+0.0
+0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
N.D.
N.D.
+0.2
+0.4
remove
mRNA_4028
plot
remove
mRNA_4029
plot
remove
mRNA_4030
remove
mRNA_4031
plot
remove
mRNA_4032
plot