Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12399 and 12400 are separated by 2682 nucleotides12400 and 12401 are separated by 269 nucleotides12401 and 12402 are separated by 1750 nucleotides12402 and 12403 are separated by 803 nucleotides mRNA_4031: 12399 - K08726 EPHX2 soluble epoxide hydrolase / lipid-phosphate phosphatase, at 1,194,331 to 1,195,759 12399 mRNA_4032: 12400 - Hypothetical Protein, at 1,198,442 to 1,200,513 12400 mRNA_4033: 12401 - K17675 SUPV3L1, SUV3 ATP-dependent RNA helicase SUPV3L1/SUV3, at 1,200,783 to 1,202,735 12401 mRNA_4034: 12402 - K13181 DDX27, DRS1 ATP-dependent RNA helicase DDX27, at 1,204,486 to 1,207,026 12402 mRNA_4035: 12403 - Hypothetical Protein, at 1,207,830 to 1,209,196 12403
Group Condition mRNA_4031 mRNA_4032 mRNA_4033 mRNA_4034 mRNA_4035
12399 12400 12401 12402 12403
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 -1.0 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.1 N.D. N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.2 N.D. N.D. N.D.
growth on ricinoleic acid YNB Glucose -0.1 +0.1 N.D. N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.2 N.D. N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.1 N.D. N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.1 N.D. N.D. N.D.
growth on oleic acid YNB Glucose +0.3 -0.2 N.D. N.D. N.D.
growth on oleic acid YNB Oleic Acid +0.2 -0.0 N.D. N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.1 N.D. N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.0 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.2 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.0 N.D. N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.3 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.1 N.D. N.D. N.D.
auxotrophy Dropout Complete +0.1 +0.3 N.D. N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.2 N.D. N.D. N.D.
auxotrophy YNB Glucose +0.3 +0.2 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.3 N.D. N.D. N.D.
growth on ypd YPD +0.0 +0.6 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.4 N.D. N.D. N.D.
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