Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12409 and 12410 are separated by 125 nucleotides12410 and 12411 are separated by 539 nucleotides12411 and 12412 are separated by 152 nucleotides12412 and 12413 are separated by 492 nucleotides mRNA_4041: 12409 - HMMPfam-Sds3-like-PF08598, at 1,221,368 to 1,222,599 12409 mRNA_4042: 12410 - KOG0807 Carbon-nitrogen hydrolase, at 1,222,725 to 1,223,895 12410 mRNA_4043: 12411 - Hypothetical Protein, at 1,224,435 to 1,225,613 12411 mRNA_4044: 12412 - Hypothetical Protein, at 1,225,766 to 1,226,356 12412 mRNA_4045: 12413 - Hypothetical Protein, at 1,226,849 to 1,229,104 12413
Group Condition mRNA_4041 mRNA_4042 mRNA_4043 mRNA_4044 mRNA_4045
12409 12410 12411 12412 12413
facs on lipid accumulation Sorted Low BODIPY Gate -4.6 -0.5 -1.5 -0.5 -0.5
facs on lipid accumulation Sorted High BODIPY Gate -3.3 +0.2 -0.0 +0.2 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -2.8 +0.3 -0.4 +0.4 -0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy -2.5 +0.2 +0.0 -0.2 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -2.0 +0.6 -0.3 +0.1 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -1.4 +0.3 +0.2 -0.3 -0.8
auxotrophy YNB Glucose 75mM Arginine -1.0 -0.3 -0.1 -0.3 -0.1
growth on ypd YPD -1.1 -0.0 +0.2 -0.6 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.4 -0.4 +0.0 -0.1 -0.1
auxotrophy YNB Glucose +0.2 -0.1 -0.3 -0.4 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 +0.2 -0.3 +0.1 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.6 +0.0 -0.4 -0.0 -0.7
growth on oleic acid YNB Oleic Acid +0.7 +0.3 -0.3 -0.4 -0.6
auxotrophy Dropout Complete +0.0 -0.2 +0.5 -0.0 -0.0
growth on ricinoleic acid YNB Glucose +0.2 +0.5 -0.3 +0.2 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 -0.2 +0.2 +0.2 +0.0
ypd buoyancy 40 hrs Low Buoyancy +0.0 +0.3 +0.3 -0.0 +0.3
growth on oleic acid YNB Glucose +1.1 +0.6 -0.3 +0.1 -0.2
ypd buoyancy 40 hrs High Buoyancy +1.2 +0.1 +0.8 -0.3 +0.0
ypd buoyancy 40 hrs Median Buoyancy +1.0 +0.2 +0.6 -0.0 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation +1.3 +0.7 +0.6 +0.7 +0.3
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