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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12411 and 12412 are separated by 152 nucleotides
12412 and 12413 are separated by 492 nucleotides
12413 and 12414 are separated by 240 nucleotides
12414 and 12415 are separated by 2406 nucleotides
mRNA_4043: 12411 - Hypothetical Protein, at 1,224,435 to 1,225,613
12411
mRNA_4044: 12412 - Hypothetical Protein, at 1,225,766 to 1,226,356
12412
mRNA_4045: 12413 - Hypothetical Protein, at 1,226,849 to 1,229,104
12413
mRNA_4046: 12414 - HMMPfam-Starch binding domain-PF00686,SUPERFAMILY--SSF49452, at 1,229,345 to 1,230,784
12414
mRNA_4047: 12415 - Hypothetical Protein, at 1,233,191 to 1,233,964
12415
Group
Condition
mRNA
_4043
mRNA
_4044
mRNA
_4045
mRNA
_4046
mRNA
_4047
12411
12412
12413
12414
12415
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.5
-0.5
-0.5
+0.2
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
+0.4
-0.6
-0.1
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
-0.2
-0.4
-0.2
-0.2
growth on oleic acid
YNB Oleic Acid
-0.3
-0.4
-0.6
+0.2
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
+0.1
-0.4
-0.1
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.3
-0.1
-0.2
-0.1
auxotrophy
YNB Glucose
-0.3
-0.4
-0.1
+0.0
+0.1
growth on ypd
YPD
+0.2
-0.6
-0.2
-0.0
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
-0.3
-0.8
+0.2
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.0
-0.1
-0.1
-0.0
-0.2
growth on oleic acid
YNB Glucose
-0.3
+0.1
-0.2
+0.2
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
-0.0
-0.7
-0.0
+0.8
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
+0.1
-0.2
+0.1
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
+0.2
-0.5
+0.4
-0.0
ypd buoyancy
40 hrs High Buoyancy
+0.8
-0.3
+0.0
-0.1
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.6
-0.0
+0.3
-0.1
-0.4
ypd buoyancy
40 hrs Low Buoyancy
+0.3
-0.0
+0.3
-0.0
-0.1
auxotrophy
Dropout Complete
+0.5
-0.0
-0.0
+0.1
-0.0
growth on ricinoleic acid
YNB Glucose
-0.3
+0.2
-0.3
+0.2
+0.6
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
+0.2
+0.0
+0.1
+0.8
ypd buoyancy
40 hrs No Buoyancy Separation
+0.6
+0.7
+0.3
-0.0
+0.0
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