Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12414 and 12415 are separated by 2406 nucleotides12415 and 12416 are separated by 218 nucleotides12416 and 12417 are separated by 1331 nucleotides12417 and 12418 are separated by 2286 nucleotides mRNA_4046: 12414 - HMMPfam-Starch binding domain-PF00686,SUPERFAMILY--SSF49452, at 1,229,345 to 1,230,784 12414 mRNA_4047: 12415 - Hypothetical Protein, at 1,233,191 to 1,233,964 12415 mRNA_4048: 12416 - Hypothetical Protein, at 1,234,183 to 1,234,746 12416 mRNA_4049: 12417 - HMMPfam-Rare lipoprotein A (RlpA)-like double-psi beta-barrel-PF03330,SUPERFAMILY--SSF50685, at 1,236,078 to 1,237,368 12417 mRNA_4050: 12418 - K02885 RP-L19e, RPL19 large subunit ribosomal protein L19e, at 1,239,655 to 1,240,764 12418
Group Condition mRNA_4046 mRNA_4047 mRNA_4048 mRNA_4049 mRNA_4050
12414 12415 12416 12417 12418
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 +0.0 -0.1 -2.6 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 +0.2 +0.3 -1.3 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.1 -0.0 -0.3 N.D.
growth on ypd YPD -0.0 -0.2 +0.0 -0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.4 +0.0 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.3 -0.1 +0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.4 -0.0 +0.1 -0.6 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.1 -0.1 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.1 +0.1 +0.0 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.1 +0.0 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.2 +0.1 +0.3 N.D.
auxotrophy Dropout Complete +0.1 -0.0 +0.2 -0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.1 -0.2 +0.4 N.D.
growth on oleic acid YNB Oleic Acid +0.2 +0.1 -0.0 +0.1 N.D.
growth on oleic acid YNB Glucose +0.2 -0.1 -0.0 +0.4 N.D.
auxotrophy YNB Glucose +0.0 +0.1 -0.1 +0.5 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.1 +0.2 +0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.2 +0.2 +0.9 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 +0.8 +0.4 +0.3 N.D.
growth on ricinoleic acid YNB Glucose +0.2 +0.6 +0.2 +0.5 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.8 +0.5 +0.8 N.D.
remove
mRNA_4046
plot
remove
mRNA_4047
plot
remove
mRNA_4048
remove
mRNA_4049
plot
remove
mRNA_4050
plot