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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12423 and 12424 are separated by 211 nucleotides
12424 and 12425 are separated by 484 nucleotides
12425 and 12426 are separated by 834 nucleotides
12426 and 12427 are separated by 329 nucleotides
mRNA_4055: 12423 - HMMPfam-Glyoxalase-like domain-PF12681,SUPERFAMILY--SSF54593, at 1,250,163 to 1,250,733
12423
mRNA_4056: 12424 - BLAST tRNA(His) guanylyltransferase [Kwoniella heveanensis ..., at 1,250,945 to 1,252,332
12424
mRNA_4057: 12425 - Hypothetical Protein, at 1,252,817 to 1,253,970
12425
mRNA_4058: 12426 - HMMPfam-Transcription factor Pcc1-PF09341, at 1,254,805 to 1,255,288
12426
mRNA_4059: 12427 - Hypothetical Protein, at 1,255,618 to 1,257,004
12427
Group
Condition
mRNA
_4055
mRNA
_4056
mRNA
_4057
mRNA
_4058
mRNA
_4059
12423
12424
12425
12426
12427
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.8
-0.3
-1.0
N.D.
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
-0.2
-1.1
N.D.
-0.0
growth on oleic acid
YNB Glucose
-0.2
+0.1
-0.3
N.D.
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
-0.3
-0.3
N.D.
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
-0.1
-0.2
N.D.
-0.0
growth on oleic acid
YNB Oleic Acid
+0.1
-0.3
-0.2
N.D.
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
-0.3
-0.0
N.D.
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
-0.3
-0.3
N.D.
+0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.1
+0.0
N.D.
+0.0
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.4
-0.0
N.D.
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.3
+0.2
+0.0
N.D.
+0.1
growth on ricinoleic acid
YNB Glucose
+0.3
-0.4
+0.3
N.D.
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
-0.6
+0.6
N.D.
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
+0.1
+0.1
N.D.
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.5
-0.1
+0.1
N.D.
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.5
-0.0
+0.0
N.D.
-0.0
growth on ypd
YPD
-0.2
-0.3
+0.7
N.D.
+0.4
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.0
+0.5
N.D.
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
+0.3
+0.0
N.D.
+0.4
auxotrophy
Dropout Complete
+0.3
+0.3
+0.5
N.D.
-0.1
auxotrophy
YNB Glucose
+0.4
+0.0
+0.4
N.D.
+0.3
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