Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12424 and 12425 are separated by 484 nucleotides12425 and 12426 are separated by 834 nucleotides12426 and 12427 are separated by 329 nucleotides12427 and 12428 are separated by 189 nucleotides mRNA_4056: 12424 - BLAST tRNA(His) guanylyltransferase [Kwoniella heveanensis ..., at 1,250,945 to 1,252,332 12424 mRNA_4057: 12425 - Hypothetical Protein, at 1,252,817 to 1,253,970 12425 mRNA_4058: 12426 - HMMPfam-Transcription factor Pcc1-PF09341, at 1,254,805 to 1,255,288 12426 mRNA_4059: 12427 - Hypothetical Protein, at 1,255,618 to 1,257,004 12427 mRNA_4060: 12428 - K01537 E3.6.3.8 Ca2+-transporting ATPase, at 1,257,194 to 1,260,711 12428
Group Condition mRNA_4056 mRNA_4057 mRNA_4058 mRNA_4059 mRNA_4060
12424 12425 12426 12427 12428
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -1.0 N.D. +0.0 -1.9
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -1.1 N.D. -0.0 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.3 N.D. +0.2 -0.7
growth on oleic acid YNB Glucose +0.1 -0.3 N.D. -0.4 -0.3
ypd buoyancy 40 hrs High Buoyancy +0.4 -0.0 N.D. -0.2 -0.8
auxotrophy YNB Glucose 75mM Methionine -0.0 +0.0 N.D. -0.0 -0.6
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 +0.6 N.D. +0.2 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.0 N.D. -0.3 +1.0
auxotrophy YNB Glucose 75mM Arginine -0.0 +0.5 N.D. -0.0 -0.1
growth on oleic acid YNB Oleic Acid -0.3 -0.2 N.D. -0.0 +1.0
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.0 N.D. +0.1 +0.2
growth on ricinoleic acid YNB Glucose -0.4 +0.3 N.D. -0.1 +0.8
growth on ypd YPD -0.3 +0.7 N.D. +0.4 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.2 N.D. -0.0 +1.0
auxotrophy Dropout Complete +0.3 +0.5 N.D. -0.1 +0.0
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.0 N.D. +0.0 +0.7
auxotrophy YNB Glucose +0.0 +0.4 N.D. +0.3 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.3 N.D. +0.1 +1.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.1 N.D. +0.1 +0.6
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.1 N.D. -0.1 +1.2
facs on lipid accumulation Sorted High BODIPY Gate +0.3 +0.0 N.D. +0.4 +0.5
remove
mRNA_4056
plot
remove
mRNA_4057
plot
remove
mRNA_4058
remove
mRNA_4059
plot
remove
mRNA_4060
plot