Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
12425 and 12426 are separated by 834 nucleotides
12426 and 12427 are separated by 329 nucleotides
12427 and 12428 are separated by 189 nucleotides
12428 and 12429 are separated by 170 nucleotides
mRNA_4057: 12425 - Hypothetical Protein, at 1,252,817 to 1,253,970
12425
mRNA_4058: 12426 - HMMPfam-Transcription factor Pcc1-PF09341, at 1,254,805 to 1,255,288
12426
mRNA_4059: 12427 - Hypothetical Protein, at 1,255,618 to 1,257,004
12427
mRNA_4060: 12428 - K01537 E3.6.3.8 Ca2+-transporting ATPase, at 1,257,194 to 1,260,711
12428
mRNA_4061: 12429 - SUPERFAMILY--SSF52540, at 1,260,882 to 1,262,989
12429
Group
Condition
mRNA
_4057
mRNA
_4058
mRNA
_4059
mRNA
_4060
mRNA
_4061
12425
12426
12427
12428
12429
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.0
N.D.
+0.0
-1.9
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-1.1
N.D.
-0.0
-0.0
-0.2
growth on oleic acid
YNB Glucose
-0.3
N.D.
-0.4
-0.3
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.0
N.D.
-0.2
-0.8
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
N.D.
+0.2
-0.7
+0.3
auxotrophy
YNB Glucose 75mM Methionine
+0.0
N.D.
-0.0
-0.6
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
+0.6
N.D.
+0.2
-0.4
-0.3
auxotrophy
Dropout Complete
+0.5
N.D.
-0.1
+0.0
-0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.5
N.D.
-0.0
-0.1
-0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.0
N.D.
+0.1
+0.2
+0.1
growth on oleic acid
YNB Oleic Acid
-0.2
N.D.
-0.0
+1.0
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.0
N.D.
+0.0
+0.7
+0.1
auxotrophy
YNB Glucose
+0.4
N.D.
+0.3
+0.3
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
N.D.
+0.1
+0.6
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
N.D.
-0.3
+1.0
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
N.D.
-0.0
+1.0
+0.2
growth on ypd
YPD
+0.7
N.D.
+0.4
-0.1
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
N.D.
+0.4
+0.5
+0.2
growth on ricinoleic acid
YNB Glucose
+0.3
N.D.
-0.1
+0.8
+0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
N.D.
-0.1
+1.2
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
N.D.
+0.1
+1.5
+0.4
remove
mRNA_4057
plot
remove
mRNA_4058
plot
remove
mRNA_4059
remove
mRNA_4060
plot
remove
mRNA_4061
plot