Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12429 and 12430 are separated by 580 nucleotides12430 and 12431 are separated by 147 nucleotides12431 and 12432 are separated by 105 nucleotides12432 and 12433 are separated by 138 nucleotides mRNA_4061: 12429 - SUPERFAMILY--SSF52540, at 1,260,882 to 1,262,989 12429 mRNA_4062: 12430 - HMMPfam-Protein of unknown function (DUF1115)-PF06544, at 1,263,570 to 1,264,744 12430 mRNA_4063: 12431 - K10777 LIG4, DNL4 DNA ligase 4, at 1,264,892 to 1,269,621 12431 mRNA_4064: 12432 - HMMPfam-Rdx family-PF10262,SUPERFAMILY--SSF52833, at 1,269,727 to 1,270,597 12432 mRNA_4065: 12433 - KOG1198 Zinc-binding oxidoreductase, at 1,270,736 to 1,272,325 12433
Group Condition mRNA_4061 mRNA_4062 mRNA_4063 mRNA_4064 mRNA_4065
12429 12430 12431 12432 12433
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 +0.0 -0.4 +0.2 -1.7
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.1 +0.2 +0.8 -1.7
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.2 -0.3 +0.7 -0.5
growth on ypd YPD +0.1 +0.3 +0.6 +0.1 -1.5
facs on lipid accumulation Sorted No BODIPY Gate +0.3 +0.0 +0.0 +0.1 -0.8
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 +0.1 +0.2 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.1 +0.3 +0.5 +0.1
growth on oleic acid YNB Glucose -0.1 +0.0 +0.2 +0.2 +0.4
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.1 -0.1 +0.8 -0.2
growth on oleic acid YNB Oleic Acid +0.1 +0.4 +0.2 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.3 +0.2 +0.3 +0.7
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 +0.4 +0.4 -0.2 +0.3
growth on ricinoleic acid YNB Glucose +0.4 +0.1 +0.3 -0.1 +0.6
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.4 -0.1 +0.1 +1.1
auxotrophy YNB Glucose -0.1 +0.3 -0.1 +0.2 +1.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 +0.2 +0.1 +0.1 +1.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 +0.6 +0.2 -0.5 +0.9
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.0 +0.3 +0.2 +0.8
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 -0.1 +0.2 +0.4 +1.1
auxotrophy Dropout Complete -0.1 +0.2 -0.1 +0.2 +1.7
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.4 -0.1 +0.2 +1.7
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