Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12434 and 12435 are separated by 131 nucleotides12435 and 12436 are separated by 539 nucleotides12436 and 12437 are separated by 171 nucleotides12437 and 12438 are separated by 678 nucleotides mRNA_4066: 12434 - K03426 E3.6.1.22, NUDT12, nudC NAD+ diphosphatase, at 1,273,272 to 1,275,258 12434 mRNA_4067: 12435 - KOG0324 Uncharacterized conserved protein, at 1,275,390 to 1,276,654 12435 mRNA_4068: 12436 - K02575 NRT, narK, nrtP, nasA MFS transporter, NNP family, nitrate/nitrite transporter, at 1,277,194 to 1,279,271 12436 mRNA_4069: 12437 - K05288 PIGO phosphatidylinositol glycan, class O, at 1,279,443 to 1,282,832 12437 mRNA_4070: 12438 - K02877 RP-L15e, RPL15 large subunit ribosomal protein L15e, at 1,283,511 to 1,284,371 12438
Group Condition mRNA_4066 mRNA_4067 mRNA_4068 mRNA_4069 mRNA_4070
12434 12435 12436 12437 12438
auxotrophy YNB Glucose 75mM Arginine -0.6 -0.3 +0.3 N.D. N.D.
auxotrophy YNB Glucose -0.4 +0.0 -0.2 N.D. N.D.
growth on ypd YPD -0.1 -0.5 +0.1 N.D. N.D.
auxotrophy Dropout Complete -0.5 -0.4 +0.4 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine -0.5 -0.2 +0.2 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 +0.3 -0.6 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 +0.3 +0.1 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.3 +0.0 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.1 +0.2 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 +0.7 +0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 +0.8 -0.1 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 +0.9 +0.0 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.7 +0.1 -0.3 N.D. N.D.
growth on oleic acid YNB Glucose +0.1 -0.2 +0.5 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.2 +0.2 N.D. N.D.
growth on ricinoleic acid YNB Glucose -0.3 +0.9 +0.2 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.3 +0.3 +0.2 N.D. N.D.
growth on oleic acid YNB Oleic Acid +0.1 +0.4 +0.4 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.4 +0.5 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.3 +0.4 +0.3 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 +0.4 +0.6 N.D. N.D.
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