Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12436 and 12437 are separated by 171 nucleotides12437 and 12438 are separated by 678 nucleotides12438 and 12439 are separated by 707 nucleotides12439 and 12440 are separated by 683 nucleotides mRNA_4068: 12436 - K02575 NRT, narK, nrtP, nasA MFS transporter, NNP family, nitrate/nitrite transporter, at 1,277,194 to 1,279,271 12436 mRNA_4069: 12437 - K05288 PIGO phosphatidylinositol glycan, class O, at 1,279,443 to 1,282,832 12437 mRNA_4070: 12438 - K02877 RP-L15e, RPL15 large subunit ribosomal protein L15e, at 1,283,511 to 1,284,371 12438 mRNA_4071: 12439 - BLAST putative upf0132 domain-containing protein [Diaporthe..., at 1,285,079 to 1,285,837 12439 mRNA_4072: 12440 - K16575 ACTR1, ARP1 centractin, at 1,286,521 to 1,288,236 12440
Group Condition mRNA_4068 mRNA_4069 mRNA_4070 mRNA_4071 mRNA_4072
12436 12437 12438 12439 12440
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 N.D. N.D. -0.3 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 N.D. N.D. +0.0 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.0 N.D. N.D. -0.1 N.D.
auxotrophy YNB Glucose -0.2 N.D. N.D. +0.3 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.2 N.D. N.D. -0.0 N.D.
growth on ricinoleic acid YNB Glucose +0.2 N.D. N.D. +0.0 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 N.D. N.D. +0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 N.D. N.D. +0.3 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 N.D. N.D. +0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.3 N.D. N.D. +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 N.D. N.D. +0.5 N.D.
auxotrophy Dropout Complete +0.4 N.D. N.D. -0.0 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.2 N.D. N.D. +0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.2 N.D. N.D. +0.2 N.D.
growth on oleic acid YNB Oleic Acid +0.4 N.D. N.D. +0.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.2 N.D. N.D. +0.3 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.6 N.D. N.D. -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 N.D. N.D. +0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.3 N.D. N.D. +0.3 N.D.
growth on ypd YPD +0.1 N.D. N.D. +0.7 N.D.
growth on oleic acid YNB Glucose +0.5 N.D. N.D. +0.3 N.D.
remove
mRNA_4068
plot		 remove
mRNA_4069
plot		 remove
mRNA_4070		 remove
mRNA_4071
plot		 remove
mRNA_4072
plot