Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12438 and 12439 are separated by 707 nucleotides12439 and 12440 are separated by 683 nucleotides12440 and 12441 are separated by 1147 nucleotides12441 and 12442 are separated by 307 nucleotides mRNA_4070: 12438 - K02877 RP-L15e, RPL15 large subunit ribosomal protein L15e, at 1,283,511 to 1,284,371 12438 mRNA_4071: 12439 - BLAST putative upf0132 domain-containing protein [Diaporthe..., at 1,285,079 to 1,285,837 12439 mRNA_4072: 12440 - K16575 ACTR1, ARP1 centractin, at 1,286,521 to 1,288,236 12440 mRNA_4073: 12441 - KOG0961 Predicted Zn2+-dependent endopeptidase, insulinase superfamily, at 1,289,384 to 1,292,413 12441 mRNA_4074: 12442 - KOG0961 Predicted Zn2+-dependent endopeptidase, insulinase superfamily, at 1,292,721 to 1,296,857 12442
Group Condition mRNA_4070 mRNA_4071 mRNA_4072 mRNA_4073 mRNA_4074
12438 12439 12440 12441 12442
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.0 N.D. -0.7 -0.4
growth on ricinoleic acid YNB Glucose N.D. +0.0 N.D. -0.2 -0.5
growth on oleic acid YNB Oleic Acid N.D. +0.0 N.D. -0.2 -0.4
auxotrophy Dropout Complete N.D. -0.0 N.D. -0.1 -0.5
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.1 N.D. -0.3 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.1 N.D. -0.2 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.3 N.D. -0.5 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.3 N.D. -0.5 -0.1
growth on oleic acid YNB Glucose N.D. +0.3 N.D. -0.4 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.3 N.D. -0.1 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.1 N.D. -0.1 -0.3
growth on ypd YPD N.D. +0.7 N.D. -0.2 -0.5
auxotrophy YNB Glucose N.D. +0.3 N.D. -0.0 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.1 N.D. +0.1 -0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.3 N.D. -0.2 +0.1
auxotrophy YNB Glucose 75mM Methionine N.D. +0.2 N.D. +0.1 -0.0
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.0 N.D. +0.2 +0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 N.D. +0.1 +0.2
auxotrophy YNB Glucose 75mM Arginine N.D. +0.3 N.D. +0.2 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.5 N.D. +0.1 -0.0
ypd buoyancy 40 hrs High Buoyancy N.D. +0.2 N.D. +0.3 +0.4
remove
mRNA_4070
plot
remove
mRNA_4071
plot
remove
mRNA_4072
remove
mRNA_4073
plot
remove
mRNA_4074
plot