Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
12439 and 12440 are separated by 683 nucleotides
12440 and 12441 are separated by 1147 nucleotides
12441 and 12442 are separated by 307 nucleotides
12442 and 12443 are separated by 289 nucleotides
mRNA_4071: 12439 - BLAST putative upf0132 domain-containing protein [Diaporthe..., at 1,285,079 to 1,285,837
12439
mRNA_4072: 12440 - K16575 ACTR1, ARP1 centractin, at 1,286,521 to 1,288,236
12440
mRNA_4073: 12441 - KOG0961 Predicted Zn2+-dependent endopeptidase, insulinase superfamily, at 1,289,384 to 1,292,413
12441
mRNA_4074: 12442 - KOG0961 Predicted Zn2+-dependent endopeptidase, insulinase superfamily, at 1,292,721 to 1,296,857
12442
mRNA_4075: 12443 - Hypothetical Protein, at 1,297,147 to 1,298,186
12443
Group
Condition
mRNA
_4071
mRNA
_4072
mRNA
_4073
mRNA
_4074
mRNA
_4075
12439
12440
12441
12442
12443
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.0
N.D.
-0.7
-0.4
-0.3
growth on oleic acid
YNB Oleic Acid
+0.0
N.D.
-0.2
-0.4
-0.1
growth on ricinoleic acid
YNB Glucose
+0.0
N.D.
-0.2
-0.5
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
N.D.
-0.3
-0.0
-0.2
auxotrophy
Dropout Complete
-0.0
N.D.
-0.1
-0.5
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
N.D.
-0.2
-0.2
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
N.D.
-0.5
-0.3
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
N.D.
-0.1
-0.3
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
N.D.
-0.5
-0.1
-0.0
growth on oleic acid
YNB Glucose
+0.3
N.D.
-0.4
-0.3
-0.0
auxotrophy
YNB Glucose
+0.3
N.D.
-0.0
-0.1
-0.2
growth on ypd
YPD
+0.7
N.D.
-0.2
-0.5
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
N.D.
-0.1
+0.1
+0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.2
N.D.
+0.1
-0.0
-0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.3
N.D.
+0.2
-0.0
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
N.D.
+0.1
-0.0
+0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.0
N.D.
+0.2
+0.1
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.5
N.D.
+0.1
-0.0
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
N.D.
-0.2
+0.1
+0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.1
N.D.
+0.1
+0.2
+0.3
ypd buoyancy
40 hrs High Buoyancy
+0.2
N.D.
+0.3
+0.4
+0.4
remove
mRNA_4071
plot
remove
mRNA_4072
plot
remove
mRNA_4073
remove
mRNA_4074
plot
remove
mRNA_4075
plot