Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12440 and 12441 are separated by 1147 nucleotides12441 and 12442 are separated by 307 nucleotides12442 and 12443 are separated by 289 nucleotides12443 and 12444 are separated by 565 nucleotides mRNA_4072: 12440 - K16575 ACTR1, ARP1 centractin, at 1,286,521 to 1,288,236 12440 mRNA_4073: 12441 - KOG0961 Predicted Zn2+-dependent endopeptidase, insulinase superfamily, at 1,289,384 to 1,292,413 12441 mRNA_4074: 12442 - KOG0961 Predicted Zn2+-dependent endopeptidase, insulinase superfamily, at 1,292,721 to 1,296,857 12442 mRNA_4075: 12443 - Hypothetical Protein, at 1,297,147 to 1,298,186 12443 mRNA_4076: 12444 - K12486 SMAP stromal membrane-associated protein, at 1,298,752 to 1,301,700 12444
Group Condition mRNA_4072 mRNA_4073 mRNA_4074 mRNA_4075 mRNA_4076
12440 12441 12442 12443 12444
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.7 -0.4 -0.3 -0.2
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.3 -0.0 -0.2 -0.3
growth on oleic acid YNB Oleic Acid N.D. -0.2 -0.4 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.5 -0.1 -0.0 -0.0
growth on oleic acid YNB Glucose N.D. -0.4 -0.3 -0.0 +0.0
growth on ypd YPD N.D. -0.2 -0.5 -0.1 +0.2
auxotrophy Dropout Complete N.D. -0.1 -0.5 -0.0 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.2 -0.2 -0.1 +0.1
growth on ricinoleic acid YNB Glucose N.D. -0.2 -0.5 -0.1 +0.4
auxotrophy YNB Glucose N.D. -0.0 -0.1 -0.2 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.5 -0.3 -0.0 +0.5
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.1 -0.3 -0.1 +0.3
auxotrophy YNB Glucose 75mM Methionine N.D. +0.1 -0.0 -0.2 +0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.2 +0.1 +0.2 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.1 -0.0 -0.2 +0.1
auxotrophy YNB Glucose 75mM Arginine N.D. +0.2 -0.0 -0.2 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.1 +0.1 +0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.2 +0.1 +0.0 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.1 -0.0 +0.2 +0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 +0.2 +0.3 -0.1
ypd buoyancy 40 hrs High Buoyancy N.D. +0.3 +0.4 +0.4 -0.1
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