Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12444 and 12445 are separated by 722 nucleotides12445 and 12446 are separated by 930 nucleotides12446 and 12447 are separated by 231 nucleotides12447 and 12448 are separated by 61 nucleotides mRNA_4076: 12444 - K12486 SMAP stromal membrane-associated protein, at 1,298,752 to 1,301,700 12444 mRNA_4077: 12445 - K07101 K07101 uncharacterized protein, at 1,302,423 to 1,303,629 12445 mRNA_4078: 12446 - K15113 SLC25A28_37, MFRN solute carrier family 25 (mitochondrial iron transporter), member 28/37, at 1,304,560 to 1,305,720 12446 mRNA_4079: 12447 - KOG2518 5'-3' exonuclease, at 1,305,952 to 1,309,026 12447 mRNA_4080: 12448 - Hypothetical Protein, at 1,309,088 to 1,309,498 12448
Group Condition mRNA_4076 mRNA_4077 mRNA_4078 mRNA_4079 mRNA_4080
12444 12445 12446 12447 12448
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.4 N.D. -2.1 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 +0.0 N.D. -0.4 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.2 N.D. -0.1 +0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.1 N.D. -0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.2 N.D. -0.1 -0.1
growth on ypd YPD +0.2 -0.4 N.D. -0.3 +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.1 N.D. +0.2 -0.3
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.1 N.D. +0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.1 N.D. +0.2 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.3 +0.2 N.D. +0.2 +0.0
growth on oleic acid YNB Glucose +0.0 +0.3 N.D. +0.4 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.1 N.D. +0.6 -0.1
growth on oleic acid YNB Oleic Acid +0.1 +0.0 N.D. +0.9 -0.4
auxotrophy YNB Glucose +0.1 -0.1 N.D. +0.7 +0.1
growth on ricinoleic acid YNB Glucose +0.4 -0.1 N.D. +0.6 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.2 N.D. +0.0 +0.9
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.2 N.D. +0.6 +0.5
auxotrophy Dropout Complete +0.2 +0.0 N.D. +0.5 +0.9
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 -0.1 N.D. +1.6 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.1 N.D. +1.0 +0.8
growth on ricinoleic acid YNB Methylricinoleic Acid +0.5 +0.0 N.D. +1.2 +0.6
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