Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12445 and 12446 are separated by 930 nucleotides12446 and 12447 are separated by 231 nucleotides12447 and 12448 are separated by 61 nucleotides12448 and 12449 are separated by 3570 nucleotides mRNA_4077: 12445 - K07101 K07101 uncharacterized protein, at 1,302,423 to 1,303,629 12445 mRNA_4078: 12446 - K15113 SLC25A28_37, MFRN solute carrier family 25 (mitochondrial iron transporter), member 28/37, at 1,304,560 to 1,305,720 12446 mRNA_4079: 12447 - KOG2518 5'-3' exonuclease, at 1,305,952 to 1,309,026 12447 mRNA_4080: 12448 - Hypothetical Protein, at 1,309,088 to 1,309,498 12448 mRNA_4081: 12449 - K09385 FOXG forkhead box protein G, at 1,313,069 to 1,313,296 12449
Group Condition mRNA_4077 mRNA_4078 mRNA_4079 mRNA_4080 mRNA_4081
12445 12446 12447 12448 12449
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 N.D. -2.1 +0.3 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 N.D. -0.4 -0.2 N.D.
growth on ypd YPD -0.4 N.D. -0.3 +0.4 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.2 N.D. -0.1 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 N.D. +0.2 -0.3 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.1 N.D. -0.1 -0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 N.D. -0.1 -0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 N.D. +0.2 -0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 N.D. +0.2 -0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.2 N.D. +0.2 +0.0 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.1 N.D. +0.6 -0.1 N.D.
growth on ricinoleic acid YNB Glucose -0.1 N.D. +0.6 +0.0 N.D.
growth on oleic acid YNB Oleic Acid +0.0 N.D. +0.9 -0.4 N.D.
growth on oleic acid YNB Glucose +0.3 N.D. +0.4 -0.1 N.D.
auxotrophy YNB Glucose -0.1 N.D. +0.7 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 N.D. +0.0 +0.9 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.2 N.D. +0.6 +0.5 N.D.
auxotrophy Dropout Complete +0.0 N.D. +0.5 +0.9 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 N.D. +1.6 +0.0 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 N.D. +1.2 +0.6 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 N.D. +1.0 +0.8 N.D.
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