Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12447 and 12448 are separated by 61 nucleotides12448 and 12449 are separated by 3570 nucleotides12449 and 12450 are separated by 2633 nucleotides12450 and 12451 are separated by 388 nucleotides mRNA_4079: 12447 - KOG2518 5'-3' exonuclease, at 1,305,952 to 1,309,026 12447 mRNA_4080: 12448 - Hypothetical Protein, at 1,309,088 to 1,309,498 12448 mRNA_4081: 12449 - K09385 FOXG forkhead box protein G, at 1,313,069 to 1,313,296 12449 mRNA_4082: 12450 - KOG2194 Aminopeptidases of the M20 family, at 1,315,930 to 1,319,483 12450 mRNA_4083: 12451 - K03593 mrp, NUBPL ATP-binding protein involved in chromosome partitioning, at 1,319,872 to 1,321,104 12451
Group Condition mRNA_4079 mRNA_4080 mRNA_4081 mRNA_4082 mRNA_4083
12447 12448 12449 12450 12451
buoyancy on lipid accumulation 40 hrs Low Buoyancy -2.1 +0.3 N.D. +0.2 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.2 N.D. +0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.2 N.D. -0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.0 N.D. -0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.3 N.D. -0.1 N.D.
growth on oleic acid YNB Glucose +0.4 -0.1 N.D. -0.3 N.D.
growth on ypd YPD -0.3 +0.4 N.D. -0.1 N.D.
growth on ricinoleic acid YNB Glucose +0.6 +0.0 N.D. -0.5 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.1 N.D. +0.3 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.1 N.D. +0.3 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.0 N.D. -0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.1 N.D. +0.1 N.D.
growth on oleic acid YNB Oleic Acid +0.9 -0.4 N.D. -0.2 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.6 -0.1 N.D. -0.2 N.D.
auxotrophy YNB Glucose +0.7 +0.1 N.D. -0.4 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.9 N.D. -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.6 +0.5 N.D. -0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +1.2 +0.6 N.D. -0.5 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +1.6 +0.0 N.D. -0.3 N.D.
auxotrophy Dropout Complete +0.5 +0.9 N.D. +0.0 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +1.0 +0.8 N.D. -0.1 N.D.
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