Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12456 and 12457 are separated by 393 nucleotides12457 and 12458 are separated by 175 nucleotides12458 and 12459 are separated by 299 nucleotides12459 and 12460 are separated by 166 nucleotides mRNA_4088: 12456 - Hypothetical Protein, at 1,329,492 to 1,330,466 12456 mRNA_4089: 12457 - Hypothetical Protein, at 1,330,860 to 1,331,971 12457 mRNA_4090: 12458 - K18327 REXO4, REX4 RNA exonuclease 4, at 1,332,147 to 1,333,809 12458 mRNA_4091: 12459 - K03362 FBXW1_11, BTRC, beta-TRCP F-box and WD-40 domain protein 1/11, at 1,334,109 to 1,336,957 12459 mRNA_4092: 12460 - KOG0941 E3 ubiquitin protein ligase, at 1,337,124 to 1,338,710 12460
Group Condition mRNA_4088 mRNA_4089 mRNA_4090 mRNA_4091 mRNA_4092
12456 12457 12458 12459 12460
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.4 N.D. -0.2 -1.6
facs on lipid accumulation Sorted No BODIPY Gate +0.0 -0.2 N.D. +0.0 -1.9
growth on ricinoleic acid YNB Glucose -0.0 -0.4 N.D. +0.1 -1.7
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 -0.3 N.D. -0.1 -1.4
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.2 N.D. -0.4 -1.4
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.0 N.D. +0.1 -1.5
growth on oleic acid YNB Glucose -0.2 +0.2 N.D. +0.1 -1.1
auxotrophy Dropout Complete +0.3 -0.0 N.D. +0.2 -1.3
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 N.D. +0.4 -1.1
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.0 N.D. +0.4 -1.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.3 N.D. -0.0 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.1 N.D. +0.0 -0.3
growth on ypd YPD +0.3 -0.5 N.D. +0.2 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 +0.3 N.D. +0.9 -1.0
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.0 N.D. -0.1 +0.0
growth on oleic acid YNB Oleic Acid -0.1 +0.6 N.D. +0.1 -0.8
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.2 N.D. +0.3 -0.5
auxotrophy YNB Glucose +0.1 -0.2 N.D. +0.4 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.2 N.D. +0.1 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.2 N.D. +0.4 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.2 N.D. +0.3 -0.0
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