Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12458 and 12459 are separated by 299 nucleotides12459 and 12460 are separated by 166 nucleotides12460 and 12461 are separated by 235 nucleotides12461 and 12462 are separated by 975 nucleotides mRNA_4090: 12458 - K18327 REXO4, REX4 RNA exonuclease 4, at 1,332,147 to 1,333,809 12458 mRNA_4091: 12459 - K03362 FBXW1_11, BTRC, beta-TRCP F-box and WD-40 domain protein 1/11, at 1,334,109 to 1,336,957 12459 mRNA_4092: 12460 - KOG0941 E3 ubiquitin protein ligase, at 1,337,124 to 1,338,710 12460 mRNA_4093: 12461 - Hypothetical Protein, at 1,338,946 to 1,342,318 12461 mRNA_4094: 12462 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 1,343,294 to 1,345,409 12462
Group Condition mRNA_4090 mRNA_4091 mRNA_4092 mRNA_4093 mRNA_4094
12458 12459 12460 12461 12462
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.2 -1.6 -0.9 -0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.0 -1.9 -0.3 -0.5
growth on ricinoleic acid YNB Glucose N.D. +0.1 -1.7 +0.2 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.1 -1.4 +0.3 -0.5
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.1 -1.5 -0.1 +0.2
growth on oleic acid YNB Glucose N.D. +0.1 -1.1 +0.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.4 -1.4 +0.6 +0.3
auxotrophy Dropout Complete N.D. +0.2 -1.3 +0.4 +0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.4 -1.1 +0.0 +0.1
auxotrophy YNB Glucose 75mM Methionine N.D. +0.4 -1.3 +0.5 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.4 +0.0 -0.7 -0.0
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.0 -0.3 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.0 -0.2 +0.2 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.9 -1.0 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.1 -0.0 +0.7 -0.9
growth on oleic acid YNB Oleic Acid N.D. +0.1 -0.8 +0.6 +0.1
growth on ypd YPD N.D. +0.2 -0.4 +0.1 +0.4
ypd buoyancy 40 hrs High Buoyancy N.D. -0.1 +0.0 +0.1 +0.2
auxotrophy YNB Glucose 75mM Arginine N.D. +0.3 -0.5 +0.4 +0.1
auxotrophy YNB Glucose N.D. +0.4 -0.3 +0.5 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.3 -0.0 +0.6 +0.1
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