Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12460 and 12461 are separated by 235 nucleotides12461 and 12462 are separated by 975 nucleotides12462 and 12463 are separated by 1358 nucleotides12463 and 12464 are separated by 396 nucleotides mRNA_4092: 12460 - KOG0941 E3 ubiquitin protein ligase, at 1,337,124 to 1,338,710 12460 mRNA_4093: 12461 - Hypothetical Protein, at 1,338,946 to 1,342,318 12461 mRNA_4094: 12462 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 1,343,294 to 1,345,409 12462 mRNA_4095: 12463 - BLAST Valine--tRNA ligase [Rhizoctonia solani], at 1,346,768 to 1,349,335 12463 mRNA_4096: 12464 - BLAST bestrophin domain protein [Rhizoctonia solani AG-3 Rh..., at 1,349,732 to 1,355,090 12464
Group Condition mRNA_4092 mRNA_4093 mRNA_4094 mRNA_4095 mRNA_4096
12460 12461 12462 12463 12464
facs on lipid accumulation Sorted No BODIPY Gate -1.9 -0.3 -0.5 -0.0 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -1.6 -0.9 -0.0 -0.2 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -1.5 -0.1 +0.2 -0.3 -0.3
growth on ricinoleic acid YNB Glucose -1.7 +0.2 -0.4 -0.2 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -1.4 +0.3 -0.5 -0.2 +0.3
growth on oleic acid YNB Glucose -1.1 +0.2 -0.1 -0.2 -0.0
auxotrophy Dropout Complete -1.3 +0.4 +0.1 -0.1 -0.0
ypd buoyancy 40 hrs Low Buoyancy -1.1 +0.0 +0.1 +0.2 -0.1
auxotrophy YNB Glucose 75mM Methionine -1.3 +0.5 +0.1 -0.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 +0.1 -0.1 +0.0 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -1.4 +0.6 +0.3 -0.3 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 -0.7 -0.0 +0.2 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.5 +0.4 +0.1 -0.3 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 +0.7 -0.9 -0.1 -0.0
growth on ypd YPD -0.4 +0.1 +0.4 -0.3 -0.0
auxotrophy YNB Glucose -0.3 +0.5 -0.0 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 +0.2 -0.2 -0.0 +0.0
growth on oleic acid YNB Oleic Acid -0.8 +0.6 +0.1 -0.1 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.3 -0.1 +0.1 +0.1 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 +0.6 +0.1 +0.1 -0.2
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.1 +0.2 +0.1 +0.2
remove
mRNA_4092
plot
remove
mRNA_4093
plot
remove
mRNA_4094
remove
mRNA_4095
plot
remove
mRNA_4096
plot