Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12462 and 12463 are separated by 1358 nucleotides12463 and 12464 are separated by 396 nucleotides12464 and 12465 are separated by 714 nucleotides12465 and 12466 are separated by 387 nucleotides mRNA_4094: 12462 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 1,343,294 to 1,345,409 12462 mRNA_4095: 12463 - BLAST Valine--tRNA ligase [Rhizoctonia solani], at 1,346,768 to 1,349,335 12463 mRNA_4096: 12464 - BLAST bestrophin domain protein [Rhizoctonia solani AG-3 Rh..., at 1,349,732 to 1,355,090 12464 mRNA_4097: 12465 - KOG1339 Aspartyl protease, at 1,355,805 to 1,357,462 12465 mRNA_4098: 12466 - K19950 SEC9 protein transport protein SEC9, at 1,357,850 to 1,359,153 12466
Group Condition mRNA_4094 mRNA_4095 mRNA_4096 mRNA_4097 mRNA_4098
12462 12463 12464 12465 12466
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 -0.2 +0.3 -1.7 N.D.
growth on ricinoleic acid YNB Glucose -0.4 -0.2 +0.2 -1.3 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.9 -0.1 -0.0 -0.6 N.D.
auxotrophy YNB Glucose -0.0 -0.2 -0.1 -1.0 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 -0.3 +0.3 -1.5 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.1 -0.1 -1.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.5 -0.0 -0.2 -0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.3 +0.0 -0.6 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.3 -0.3 -0.2 N.D.
growth on oleic acid YNB Glucose -0.1 -0.2 -0.0 -0.3 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.2 -0.0 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.0 +0.0 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.1 -0.2 -0.5 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 +0.0 +0.1 -0.5 N.D.
growth on ypd YPD +0.4 -0.3 -0.0 -0.3 N.D.
auxotrophy Dropout Complete +0.1 -0.1 -0.0 -0.2 N.D.
growth on oleic acid YNB Oleic Acid +0.1 -0.1 +0.1 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 +0.2 +0.1 +0.0 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.2 -0.1 +0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 +0.2 -0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.1 +0.2 +0.0 N.D.
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