Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12463 and 12464 are separated by 396 nucleotides12464 and 12465 are separated by 714 nucleotides12465 and 12466 are separated by 387 nucleotides12466 and 12467 are separated by 206 nucleotides mRNA_4095: 12463 - BLAST Valine--tRNA ligase [Rhizoctonia solani], at 1,346,768 to 1,349,335 12463 mRNA_4096: 12464 - BLAST bestrophin domain protein [Rhizoctonia solani AG-3 Rh..., at 1,349,732 to 1,355,090 12464 mRNA_4097: 12465 - KOG1339 Aspartyl protease, at 1,355,805 to 1,357,462 12465 mRNA_4098: 12466 - K19950 SEC9 protein transport protein SEC9, at 1,357,850 to 1,359,153 12466 mRNA_4099: 12467 - HMMPfam-Phenolic acid decarboxylase (PAD)-PF05870,SUPERFAMILY--SSF50814, at 1,359,360 to 1,360,302 12467
Group Condition mRNA_4095 mRNA_4096 mRNA_4097 mRNA_4098 mRNA_4099
12463 12464 12465 12466 12467
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 +0.3 -1.5 N.D. -0.7
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.3 -1.7 N.D. -0.5
auxotrophy YNB Glucose -0.2 -0.1 -1.0 N.D. -0.2
growth on ricinoleic acid YNB Glucose -0.2 +0.2 -1.3 N.D. -0.0
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.1 -1.0 N.D. -0.0
growth on oleic acid YNB Glucose -0.2 -0.0 -0.3 N.D. -0.4
auxotrophy YNB Glucose 75mM Arginine -0.3 +0.0 -0.6 N.D. +0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.3 -0.2 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.2 -0.5 N.D. -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.0 -0.6 N.D. +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 +0.0 -0.3 N.D. -0.1
auxotrophy Dropout Complete -0.1 -0.0 -0.2 N.D. -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.0 -0.3 N.D. +0.3
growth on oleic acid YNB Oleic Acid -0.1 +0.1 -0.1 N.D. +0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.2 -0.1 N.D. +0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 +0.1 -0.5 N.D. +0.3
growth on ypd YPD -0.3 -0.0 -0.3 N.D. +0.7
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.2 -0.0 N.D. -0.2
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.2 +0.0 N.D. -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.1 +0.0 N.D. +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.1 +0.2 N.D. +0.2
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