Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12464 and 12465 are separated by 714 nucleotides12465 and 12466 are separated by 387 nucleotides12466 and 12467 are separated by 206 nucleotides12467 and 12468 are separated by 344 nucleotides mRNA_4096: 12464 - BLAST bestrophin domain protein [Rhizoctonia solani AG-3 Rh..., at 1,349,732 to 1,355,090 12464 mRNA_4097: 12465 - KOG1339 Aspartyl protease, at 1,355,805 to 1,357,462 12465 mRNA_4098: 12466 - K19950 SEC9 protein transport protein SEC9, at 1,357,850 to 1,359,153 12466 mRNA_4099: 12467 - HMMPfam-Phenolic acid decarboxylase (PAD)-PF05870,SUPERFAMILY--SSF50814, at 1,359,360 to 1,360,302 12467 mRNA_4100: 12468 - K01253 EPHX1 microsomal epoxide hydrolase, at 1,360,647 to 1,362,471 12468
Group Condition mRNA_4096 mRNA_4097 mRNA_4098 mRNA_4099 mRNA_4100
12464 12465 12466 12467 12468
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 -1.5 N.D. -0.7 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 -1.7 N.D. -0.5 +0.2
auxotrophy YNB Glucose -0.1 -1.0 N.D. -0.2 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.1 -1.0 N.D. -0.0 +0.1
growth on ricinoleic acid YNB Glucose +0.2 -1.3 N.D. -0.0 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.0 -0.6 N.D. +0.0 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.2 N.D. +0.1 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.5 N.D. +0.3 -0.6
growth on oleic acid YNB Glucose -0.0 -0.3 N.D. -0.4 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 -0.3 N.D. -0.1 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.5 N.D. -0.1 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.6 N.D. +0.3 -0.0
auxotrophy Dropout Complete -0.0 -0.2 N.D. -0.0 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.0 N.D. -0.2 -0.2
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.0 N.D. -0.2 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.1 N.D. +0.3 -0.1
growth on ypd YPD -0.0 -0.3 N.D. +0.7 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.3 N.D. +0.3 +0.0
growth on oleic acid YNB Oleic Acid +0.1 -0.1 N.D. +0.0 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.2 N.D. +0.2 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.0 N.D. +0.1 +0.3
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