Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12467 and 12468 are separated by 344 nucleotides12468 and 12469 are separated by 53 nucleotides12469 and 12470 are separated by 111 nucleotides12470 and 12471 are separated by 240 nucleotides mRNA_4099: 12467 - HMMPfam-Phenolic acid decarboxylase (PAD)-PF05870,SUPERFAMILY--SSF50814, at 1,359,360 to 1,360,302 12467 mRNA_4100: 12468 - K01253 EPHX1 microsomal epoxide hydrolase, at 1,360,647 to 1,362,471 12468 mRNA_4101: 12469 - Hypothetical Protein, at 1,362,525 to 1,362,683 12469 mRNA_4102: 12470 - K01889 FARSA, pheS phenylalanyl-tRNA synthetase alpha chain, at 1,362,795 to 1,364,929 12470 mRNA_4103: 12471 - K00326 E1.6.2.2 cytochrome-b5 reductase, at 1,365,170 to 1,366,480 12471
Group Condition mRNA_4099 mRNA_4100 mRNA_4101 mRNA_4102 mRNA_4103
12467 12468 12469 12470 12471
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 -0.0 -0.9 N.D. N.D.
auxotrophy YNB Glucose -0.2 -0.0 -0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.2 -0.0 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine -0.0 +0.1 -0.4 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.7 -0.1 +0.5 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine +0.0 -0.2 -0.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.3 -0.6 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.3 -0.0 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.3 +0.3 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.3 -0.4 N.D. N.D.
auxotrophy Dropout Complete -0.0 -0.1 +0.0 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.2 +0.6 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.3 -0.1 -0.1 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 -0.6 +0.5 N.D. N.D.
growth on oleic acid YNB Glucose -0.4 +0.1 +0.7 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.1 +0.4 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 +0.2 +1.2 N.D. N.D.
growth on ricinoleic acid YNB Glucose -0.0 +0.1 +0.9 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 +0.0 +0.7 N.D. N.D.
growth on oleic acid YNB Oleic Acid +0.0 +0.1 +1.1 N.D. N.D.
growth on ypd YPD +0.7 -0.3 +1.5 N.D. N.D.
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