Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
12474 and 12475 are separated by 211 nucleotides
12475 and 12476 are separated by 141 nucleotides
12476 and 12477 are separated by 418 nucleotides
12477 and 12478 are separated by 496 nucleotides
mRNA_4106: 12474 - HMMPfam-L-lysine 6-monooxygenase (NADPH-requiring)-PF13434,SUPERFAMILY--SSF51905, at 1,370,124 to 1,372,356
12474
mRNA_4107: 12475 - K00621 GNPNAT1, GNA1 glucosamine-phosphate N-acetyltransferase, at 1,372,568 to 1,373,212
12475
mRNA_4108: 12476 - HMMPfam-Aminotransferase class IV-PF01063,SUPERFAMILY--SSF56752, at 1,373,354 to 1,374,334
12476
mRNA_4109: 12477 - Hypothetical Protein, at 1,374,753 to 1,375,099
12477
mRNA_4110: 12478 - BLAST metal resistance protein ycf1 [Trichosporon asahii va..., at 1,375,596 to 1,376,142
12478
Group
Condition
mRNA
_4106
mRNA
_4107
mRNA
_4108
mRNA
_4109
mRNA
_4110
12474
12475
12476
12477
12478
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
N.D.
-0.3
+0.0
-3.0
growth on ypd
YPD
-0.4
N.D.
-0.8
-0.4
-1.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.5
N.D.
+0.8
-1.0
-1.8
growth on oleic acid
YNB Oleic Acid
+0.1
N.D.
+0.2
-0.8
-1.4
auxotrophy
Dropout Complete
+0.1
N.D.
-0.1
-0.0
-1.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
N.D.
-0.1
-0.2
-1.0
auxotrophy
YNB Glucose
+0.0
N.D.
+0.1
-0.5
-1.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
N.D.
-0.2
-0.2
-0.7
auxotrophy
YNB Glucose 75mM Methionine
-0.1
N.D.
-0.1
-0.6
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
N.D.
-0.0
-1.3
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
N.D.
+0.6
-0.7
-0.4
growth on oleic acid
YNB Glucose
+0.1
N.D.
+0.2
-0.6
-0.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
N.D.
-0.1
-0.3
-0.3
auxotrophy
YNB Glucose 75mM Arginine
+0.1
N.D.
-0.1
+0.1
-0.6
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
N.D.
-0.4
-0.0
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
N.D.
-0.0
-0.2
+0.1
growth on ricinoleic acid
YNB Glucose
+0.1
N.D.
+0.8
+0.1
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.1
N.D.
-0.1
+1.2
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.4
N.D.
+0.2
+0.7
+0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.2
N.D.
-0.5
+1.2
+0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
N.D.
-0.4
+1.3
+1.4
remove
mRNA_4106
plot
remove
mRNA_4107
plot
remove
mRNA_4108
remove
mRNA_4109
plot
remove
mRNA_4110
plot