Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12474 and 12475 are separated by 211 nucleotides12475 and 12476 are separated by 141 nucleotides12476 and 12477 are separated by 418 nucleotides12477 and 12478 are separated by 496 nucleotides mRNA_4106: 12474 - HMMPfam-L-lysine 6-monooxygenase (NADPH-requiring)-PF13434,SUPERFAMILY--SSF51905, at 1,370,124 to 1,372,356 12474 mRNA_4107: 12475 - K00621 GNPNAT1, GNA1 glucosamine-phosphate N-acetyltransferase, at 1,372,568 to 1,373,212 12475 mRNA_4108: 12476 - HMMPfam-Aminotransferase class IV-PF01063,SUPERFAMILY--SSF56752, at 1,373,354 to 1,374,334 12476 mRNA_4109: 12477 - Hypothetical Protein, at 1,374,753 to 1,375,099 12477 mRNA_4110: 12478 - BLAST metal resistance protein ycf1 [Trichosporon asahii va..., at 1,375,596 to 1,376,142 12478
Group Condition mRNA_4106 mRNA_4107 mRNA_4108 mRNA_4109 mRNA_4110
12474 12475 12476 12477 12478
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 N.D. -0.3 +0.0 -3.0
growth on ypd YPD -0.4 N.D. -0.8 -0.4 -1.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 N.D. +0.8 -1.0 -1.8
growth on oleic acid YNB Oleic Acid +0.1 N.D. +0.2 -0.8 -1.4
auxotrophy Dropout Complete +0.1 N.D. -0.1 -0.0 -1.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 N.D. -0.1 -0.2 -1.0
auxotrophy YNB Glucose +0.0 N.D. +0.1 -0.5 -1.0
facs on lipid accumulation Sorted No BODIPY Gate -0.1 N.D. -0.2 -0.2 -0.7
auxotrophy YNB Glucose 75mM Methionine -0.1 N.D. -0.1 -0.6 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 N.D. -0.0 -1.3 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 N.D. +0.6 -0.7 -0.4
growth on oleic acid YNB Glucose +0.1 N.D. +0.2 -0.6 -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 N.D. -0.1 -0.3 -0.3
auxotrophy YNB Glucose 75mM Arginine +0.1 N.D. -0.1 +0.1 -0.6
facs on lipid accumulation Sorted High BODIPY Gate +0.2 N.D. -0.4 -0.0 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 N.D. -0.0 -0.2 +0.1
growth on ricinoleic acid YNB Glucose +0.1 N.D. +0.8 +0.1 -0.3
ypd buoyancy 40 hrs High Buoyancy -0.1 N.D. -0.1 +1.2 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.4 N.D. +0.2 +0.7 +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.2 N.D. -0.5 +1.2 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 N.D. -0.4 +1.3 +1.4
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