Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12476 and 12477 are separated by 418 nucleotides12477 and 12478 are separated by 496 nucleotides12478 and 12479 are separated by 419 nucleotides12479 and 12480 are separated by 371 nucleotides mRNA_4108: 12476 - HMMPfam-Aminotransferase class IV-PF01063,SUPERFAMILY--SSF56752, at 1,373,354 to 1,374,334 12476 mRNA_4109: 12477 - Hypothetical Protein, at 1,374,753 to 1,375,099 12477 mRNA_4110: 12478 - BLAST metal resistance protein ycf1 [Trichosporon asahii va..., at 1,375,596 to 1,376,142 12478 mRNA_4111: 12479 - K20296 ANG2, VPS51 vacuolar protein sorting-associated protein 51, at 1,376,562 to 1,377,671 12479 mRNA_4112: 12480 - HMMPfam-Mannosyltransferase putative-PF11051,SUPERFAMILY--SSF53448, at 1,378,043 to 1,379,698 12480
Group Condition mRNA_4108 mRNA_4109 mRNA_4110 mRNA_4111 mRNA_4112
12476 12477 12478 12479 12480
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +0.0 -3.0 -0.8 +0.2
growth on ypd YPD -0.8 -0.4 -1.5 +0.2 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.8 -1.0 -1.8 +0.1 -0.0
growth on oleic acid YNB Oleic Acid +0.2 -0.8 -1.4 +0.0 +0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.2 -0.7 -0.1 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.2 -1.0 +0.3 -0.6
growth on oleic acid YNB Glucose +0.2 -0.6 -0.6 -0.4 -0.0
auxotrophy YNB Glucose +0.1 -0.5 -1.0 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.3 -0.3 +0.4 -0.7
auxotrophy Dropout Complete -0.1 -0.0 -1.6 +0.3 +0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.0 +0.1 +0.1 -0.7
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -1.3 +0.2 +0.4 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.6 -0.7 -0.4 +0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.6 -0.4 +0.4 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.1 -0.6 +0.4 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.2 +0.1 -0.3 +0.2
ypd buoyancy 40 hrs High Buoyancy -0.1 +1.2 -0.3 -0.5 -0.2
growth on ricinoleic acid YNB Glucose +0.8 +0.1 -0.3 +0.0 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.7 +0.3 +0.1 +0.0
ypd buoyancy 40 hrs Median Buoyancy -0.5 +1.2 +0.3 +0.1 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 +1.3 +1.4 -0.2 -0.0
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