Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12487 and 12488 are separated by 1855 nucleotides12488 and 12489 are separated by 180 nucleotides12489 and 12490 are separated by 222 nucleotides12490 and 12491 are separated by 285 nucleotides mRNA_4119: 12487 - KOG0118 FOG RRM domain, at 1,395,124 to 1,396,771 12487 mRNA_4120: 12488 - Hypothetical Protein, at 1,398,627 to 1,399,035 12488 mRNA_4121: 12489 - KOG3195 Uncharacterized membrane protein NPD008/CGI-148, at 1,399,216 to 1,400,320 12489 mRNA_4122: 12490 - BLAST proteophosphoglycan ppg4 [Moniliophthora roreri M..., at 1,400,543 to 1,402,480 12490 mRNA_4123: 12491 - KOG4510 Permease of the drug/metabolite transporter (DMT) superfamily, at 1,402,766 to 1,404,670 12491
Group Condition mRNA_4119 mRNA_4120 mRNA_4121 mRNA_4122 mRNA_4123
12487 12488 12489 12490 12491
auxotrophy YNB Glucose 75mM Methionine -0.7 +0.2 -0.0 N.D. -0.5
ypd buoyancy 40 hrs High Buoyancy -0.3 +0.0 -0.2 N.D. -0.5
growth on oleic acid YNB Glucose -0.2 -0.1 -0.2 N.D. -0.4
growth on ypd YPD -0.7 +0.2 +0.1 N.D. -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.8 +0.0 -0.2 N.D. +0.3
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.1 -0.2 N.D. -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.3 -0.6 N.D. -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 -0.1 -0.1 N.D. +0.4
auxotrophy Dropout Complete -0.1 +0.1 -0.1 N.D. -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.2 +0.5 N.D. -0.3
growth on ricinoleic acid YNB Glucose -0.4 -0.1 +0.2 N.D. +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 -0.1 -0.5 N.D. +0.1
growth on oleic acid YNB Oleic Acid +0.1 -0.1 +0.1 N.D. -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.1 +0.1 N.D. -0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.8 -0.0 +0.4 N.D. +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 -0.5 -0.4 N.D. +0.6
facs on lipid accumulation Sorted High BODIPY Gate -0.4 +0.6 -0.3 N.D. +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.0 +0.2 N.D. -0.0
auxotrophy YNB Glucose -0.1 +0.1 +0.3 N.D. +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 +0.2 +0.3 N.D. +0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.3 +0.7 N.D. -0.5
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