Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
12488 and 12489 are separated by 180 nucleotides
12489 and 12490 are separated by 222 nucleotides
12490 and 12491 are separated by 285 nucleotides
12491 and 12492 are separated by 885 nucleotides
mRNA_4120: 12488 - Hypothetical Protein, at 1,398,627 to 1,399,035
12488
mRNA_4121: 12489 - KOG3195 Uncharacterized membrane protein NPD008/CGI-148, at 1,399,216 to 1,400,320
12489
mRNA_4122: 12490 - BLAST proteophosphoglycan ppg4 [Moniliophthora roreri M..., at 1,400,543 to 1,402,480
12490
mRNA_4123: 12491 - KOG4510 Permease of the drug/metabolite transporter (DMT) superfamily, at 1,402,766 to 1,404,670
12491
mRNA_4124: 12492 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 1,405,556 to 1,407,296
12492
Group
Condition
mRNA
_4120
mRNA
_4121
mRNA
_4122
mRNA
_4123
mRNA
_4124
12488
12489
12490
12491
12492
growth on oleic acid
YNB Glucose
-0.1
-0.2
N.D.
-0.4
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
-0.6
N.D.
-0.1
-0.0
ypd buoyancy
40 hrs High Buoyancy
+0.0
-0.2
N.D.
-0.5
+0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.2
-0.0
N.D.
-0.5
-0.1
growth on oleic acid
YNB Oleic Acid
-0.1
+0.1
N.D.
-0.1
-0.3
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.2
N.D.
-0.1
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.5
N.D.
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.5
-0.4
N.D.
+0.6
+0.0
growth on ypd
YPD
+0.2
+0.1
N.D.
-0.6
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
+0.2
N.D.
-0.0
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.5
N.D.
-0.3
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.1
N.D.
-0.0
+0.0
auxotrophy
Dropout Complete
+0.1
-0.1
N.D.
-0.2
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.1
N.D.
+0.4
-0.2
growth on ricinoleic acid
YNB Glucose
-0.1
+0.2
N.D.
+0.2
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
+0.7
N.D.
-0.5
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
-0.2
N.D.
+0.3
+0.3
facs on lipid accumulation
Sorted High BODIPY Gate
+0.6
-0.3
N.D.
+0.3
-0.3
auxotrophy
YNB Glucose
+0.1
+0.3
N.D.
+0.0
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
+0.3
N.D.
+0.3
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
+0.4
N.D.
+0.4
+0.1
remove
mRNA_4120
plot
remove
mRNA_4121
plot
remove
mRNA_4122
remove
mRNA_4123
plot
remove
mRNA_4124
plot