Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12490 and 12491 are separated by 285 nucleotides12491 and 12492 are separated by 885 nucleotides12492 and 12493 are separated by 471 nucleotides12493 and 12494 are separated by 911 nucleotides mRNA_4122: 12490 - BLAST proteophosphoglycan ppg4 [Moniliophthora roreri M..., at 1,400,543 to 1,402,480 12490 mRNA_4123: 12491 - KOG4510 Permease of the drug/metabolite transporter (DMT) superfamily, at 1,402,766 to 1,404,670 12491 mRNA_4124: 12492 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 1,405,556 to 1,407,296 12492 mRNA_4125: 12493 - KOG0627 Heat shock transcription factor, at 1,407,768 to 1,409,382 12493 mRNA_4126: 12494 - K20408 WDR24 WD repeat-containing protein 24, at 1,410,294 to 1,414,666 12494
Group Condition mRNA_4122 mRNA_4123 mRNA_4124 mRNA_4125 mRNA_4126
12490 12491 12492 12493 12494
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.5 -0.2 -1.0 -0.4
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.3 -0.1 -0.6 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.0 -0.3 -0.7 -0.0
growth on oleic acid YNB Oleic Acid N.D. -0.1 -0.3 -0.6 +0.3
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.1 -0.0 -0.2 -0.2
growth on oleic acid YNB Glucose N.D. -0.4 -0.1 -0.1 -0.0
auxotrophy YNB Glucose 75mM Methionine N.D. -0.5 -0.1 -0.1 +0.2
auxotrophy YNB Glucose 75mM Arginine N.D. -0.1 -0.1 -0.3 +0.2
growth on ricinoleic acid YNB Glucose N.D. +0.2 -0.1 -0.3 -0.0
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.3 -0.3 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.4 -0.2 -0.2 -0.1
growth on ypd YPD N.D. -0.6 +0.1 +0.1 +0.3
ypd buoyancy 40 hrs High Buoyancy N.D. -0.5 +0.2 +0.3 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.1 +0.1 +0.2 -0.4
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.0 +0.0 +0.2 +0.0
auxotrophy YNB Glucose N.D. +0.0 +0.3 -0.3 +0.3
auxotrophy Dropout Complete N.D. -0.2 +0.2 +0.1 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.4 +0.1 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.3 +0.1 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.3 +0.3 +0.0 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.6 +0.0 +0.2 +0.0
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