Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12492 and 12493 are separated by 471 nucleotides12493 and 12494 are separated by 911 nucleotides12494 and 12495 are separated by 660 nucleotides12495 and 12496 are separated by 64 nucleotides mRNA_4124: 12492 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 1,405,556 to 1,407,296 12492 mRNA_4125: 12493 - KOG0627 Heat shock transcription factor, at 1,407,768 to 1,409,382 12493 mRNA_4126: 12494 - K20408 WDR24 WD repeat-containing protein 24, at 1,410,294 to 1,414,666 12494 mRNA_4127: 12495 - K00793 ribE, RIB5 riboflavin synthase, at 1,415,327 to 1,416,353 12495 mRNA_4128: 12496 - K02926 RP-L4, MRPL4, rplD large subunit ribosomal protein L4, at 1,416,418 to 1,417,570 12496
Group Condition mRNA_4124 mRNA_4125 mRNA_4126 mRNA_4127 mRNA_4128
12492 12493 12494 12495 12496
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.2 -0.4 N.D. -1.5
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -1.0 -0.4 N.D. +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.7 -0.0 N.D. +0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.1 -0.1 N.D. -0.7
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.6 -0.1 N.D. +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.2 -0.1 N.D. -0.3
growth on oleic acid YNB Oleic Acid -0.3 -0.6 +0.3 N.D. -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.0 -0.2 N.D. -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.2 -0.2 N.D. +0.1
growth on oleic acid YNB Glucose -0.1 -0.1 -0.0 N.D. -0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.3 +0.2 N.D. -0.1
growth on ricinoleic acid YNB Glucose -0.1 -0.3 -0.0 N.D. +0.5
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.1 +0.2 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.1 +0.2 N.D. +0.1
auxotrophy YNB Glucose +0.3 -0.3 +0.3 N.D. +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.2 +0.0 N.D. +0.1
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.3 -0.1 N.D. -0.2
auxotrophy Dropout Complete +0.2 +0.1 +0.3 N.D. -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 +0.2 +0.0 N.D. +0.1
growth on ypd YPD +0.1 +0.1 +0.3 N.D. +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 +0.0 +0.2 N.D. +0.6
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