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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12501 and 12502 are separated by 670 nucleotides
12502 and 12503 are separated by 1328 nucleotides
12503 and 12504 are separated by 2771 nucleotides
12504 and 12505 are separated by 1009 nucleotides
mRNA_4133: 12501 - Hypothetical Protein, at 1,428,021 to 1,428,981
12501
mRNA_4134: 12502 - Hypothetical Protein, at 1,429,652 to 1,434,767
12502
mRNA_4135: 12503 - Hypothetical Protein, at 1,436,096 to 1,437,124
12503
mRNA_4136: 12504 - K19838 SST2 GTPase-activating protein SST2, at 1,439,896 to 1,442,005
12504
mRNA_4137: 12505 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 1,443,015 to 1,447,458
12505
Group
Condition
mRNA
_4133
mRNA
_4134
mRNA
_4135
mRNA
_4136
mRNA
_4137
12501
12502
12503
12504
12505
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.0
+0.2
N.D.
-1.7
-1.3
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
-0.8
N.D.
-0.2
-0.6
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
+0.2
N.D.
-1.1
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
-0.2
N.D.
+0.3
-1.4
ypd buoyancy
40 hrs Low Buoyancy
-0.0
-0.1
N.D.
-1.0
+0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
-0.0
N.D.
-0.3
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
-0.1
N.D.
-0.8
+0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
+0.0
N.D.
-0.8
+0.8
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
-0.0
N.D.
-0.3
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
-0.3
N.D.
-0.8
+0.7
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
-0.0
N.D.
-0.7
+0.7
ypd buoyancy
40 hrs Median Buoyancy
+0.0
+0.0
N.D.
+0.0
+0.1
growth on ypd
YPD
-0.1
-0.0
N.D.
+0.0
+0.2
ypd buoyancy
40 hrs High Buoyancy
+0.1
-0.0
N.D.
+0.0
+0.1
growth on oleic acid
YNB Glucose
+0.1
-0.1
N.D.
+0.0
+0.4
growth on oleic acid
YNB Oleic Acid
+0.1
-0.2
N.D.
-0.3
+1.2
growth on ricinoleic acid
YNB Glucose
+0.1
-0.1
N.D.
-0.2
+0.9
auxotrophy
YNB Glucose 75mM Methionine
+0.2
-0.2
N.D.
+0.2
+0.6
auxotrophy
YNB Glucose 75mM Arginine
+0.0
+0.1
N.D.
+0.1
+0.8
auxotrophy
YNB Glucose
+0.1
-0.1
N.D.
+0.1
+0.9
auxotrophy
Dropout Complete
-0.0
-0.3
N.D.
+0.1
+1.2
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