Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12503 and 12504 are separated by 2771 nucleotides12504 and 12505 are separated by 1009 nucleotides12505 and 12506 are separated by 639 nucleotides12506 and 12507 are separated by 335 nucleotides mRNA_4135: 12503 - Hypothetical Protein, at 1,436,096 to 1,437,124 12503 mRNA_4136: 12504 - K19838 SST2 GTPase-activating protein SST2, at 1,439,896 to 1,442,005 12504 mRNA_4137: 12505 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 1,443,015 to 1,447,458 12505 mRNA_4138: 12506 - HMMPfam-Cytochrome c oxidase subunit VIIa-PF02238, at 1,448,098 to 1,448,646 12506 mRNA_4139: 12507 - K14846 RPF1 ribosome production factor 1, at 1,448,982 to 1,450,816 12507
Group Condition mRNA_4135 mRNA_4136 mRNA_4137 mRNA_4138 mRNA_4139
12503 12504 12505 12506 12507
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.8 +0.5 -3.9 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -1.7 -1.3 -1.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.7 +0.7 -2.7 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. -1.1 -0.2 -1.3 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.3 -1.4 -0.9 N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.8 +0.8 -1.8 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. -1.0 +0.5 -1.2 N.D.
growth on ricinoleic acid YNB Glucose N.D. -0.2 +0.9 -1.7 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.3 -0.2 -0.3 N.D.
growth on oleic acid YNB Oleic Acid N.D. -0.3 +1.2 -1.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.0 +0.1 -0.5 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.2 -0.6 +0.6 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.8 +0.7 -0.1 N.D.
auxotrophy YNB Glucose N.D. +0.1 +0.9 -1.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.3 -0.0 +0.4 N.D.
growth on ypd YPD N.D. +0.0 +0.2 -0.0 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. +0.1 +0.8 -0.6 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. +0.2 +0.6 -0.5 N.D.
growth on oleic acid YNB Glucose N.D. +0.0 +0.4 +0.1 N.D.
auxotrophy Dropout Complete N.D. +0.1 +1.2 -0.3 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. +0.0 +0.1 +1.4 N.D.
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