Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12504 and 12505 are separated by 1009 nucleotides12505 and 12506 are separated by 639 nucleotides12506 and 12507 are separated by 335 nucleotides12507 and 12508 are separated by 272 nucleotides mRNA_4136: 12504 - K19838 SST2 GTPase-activating protein SST2, at 1,439,896 to 1,442,005 12504 mRNA_4137: 12505 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 1,443,015 to 1,447,458 12505 mRNA_4138: 12506 - HMMPfam-Cytochrome c oxidase subunit VIIa-PF02238, at 1,448,098 to 1,448,646 12506 mRNA_4139: 12507 - K14846 RPF1 ribosome production factor 1, at 1,448,982 to 1,450,816 12507 mRNA_4140: 12508 - HMMPfam-Mitochondrial genome maintenance MGM101-PF06420, at 1,451,089 to 1,452,303 12508
Group Condition mRNA_4136 mRNA_4137 mRNA_4138 mRNA_4139 mRNA_4140
12504 12505 12506 12507 12508
growth on ricinoleic acid YNB Ricinoleic Acid -0.8 +0.5 -3.9 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -1.7 -1.3 -1.1 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.7 +0.7 -2.7 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate -1.1 -0.2 -1.3 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 -1.4 -0.9 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.8 +0.8 -1.8 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy -1.0 +0.5 -1.2 N.D. N.D.
growth on ricinoleic acid YNB Glucose -0.2 +0.9 -1.7 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.2 -0.3 N.D. N.D.
growth on oleic acid YNB Oleic Acid -0.3 +1.2 -1.3 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.1 -0.5 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.6 +0.6 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.8 +0.7 -0.1 N.D. N.D.
auxotrophy YNB Glucose +0.1 +0.9 -1.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.0 +0.4 N.D. N.D.
growth on ypd YPD +0.0 +0.2 -0.0 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.8 -0.6 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.6 -0.5 N.D. N.D.
growth on oleic acid YNB Glucose +0.0 +0.4 +0.1 N.D. N.D.
auxotrophy Dropout Complete +0.1 +1.2 -0.3 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.1 +1.4 N.D. N.D.
remove
mRNA_4136
plot
remove
mRNA_4137
plot
remove
mRNA_4138
remove
mRNA_4139
plot
remove
mRNA_4140
plot