Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12511 and 12512 are separated by 199 nucleotides12512 and 12513 are separated by 504 nucleotides12513 and 12514 are separated by 896 nucleotides12514 and 12515 are separated by 443 nucleotides mRNA_4143: 12511 - HMMPfam-Acetyltransferase (GNAT) family-PF00583,HMMPfam-Acetyltransferase (GNAT) domain-PF13444,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 1,456,221 to 1,457,720 12511 mRNA_4144: 12512 - K01669 phrB deoxyribodipyrimidine photo-lyase, at 1,457,920 to 1,460,424 12512 mRNA_4145: 12513 - K00641 metX homoserine O-acetyltransferase, at 1,460,929 to 1,462,648 12513 mRNA_4146: 12514 - Hypothetical Protein, at 1,463,545 to 1,465,730 12514 mRNA_4147: 12515 - HMMPfam-NAD(P)-binding Rossmann-like domain-PF13450,PRINTS-Adrenodoxin reductase family signature-PR00419,SUPERFAMILY--SSF51905, at 1,466,174 to 1,468,597 12515
Group Condition mRNA_4143 mRNA_4144 mRNA_4145 mRNA_4146 mRNA_4147
12511 12512 12513 12514 12515
auxotrophy YNB Glucose 75mM Arginine -0.7 +0.0 -7.0 -0.4 -0.8
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 -0.6 -5.2 -0.1 -0.5
growth on ricinoleic acid YNB Glucose -0.2 -0.9 -5.4 -0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.7 -5.5 -0.4 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 -1.5 -4.2 -0.7 +0.2
auxotrophy YNB Glucose -0.5 -0.3 -5.2 -0.2 -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -1.5 -3.0 -0.5 -1.2
growth on oleic acid YNB Glucose -0.4 +0.0 -5.5 +0.3 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.2 -5.7 -0.1 +0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.4 -0.4 -3.5 +0.0 -1.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.1 -5.0 -0.2 +0.0
growth on oleic acid YNB Oleic Acid -0.2 -0.2 -3.9 -0.1 -0.7
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 +0.1 -3.5 -0.2 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.3 -2.8 -0.3 +0.3
auxotrophy YNB Glucose 75mM Methionine -0.4 -0.1 -0.8 -0.0 -0.5
auxotrophy Dropout Complete -0.6 +0.2 -0.4 -0.3 -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.4 -1.1 -0.0 +0.1 +0.5
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 +0.2 +0.7 +0.1 -1.4
growth on ypd YPD +0.1 -0.1 -0.3 +0.2 -0.5
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.6 -0.1 +0.2 -0.4
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.7 -0.2 +0.2 -0.3
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