Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
12512 and 12513 are separated by 504 nucleotides
12513 and 12514 are separated by 896 nucleotides
12514 and 12515 are separated by 443 nucleotides
12515 and 12516 are separated by 194 nucleotides
mRNA_4144: 12512 - K01669 phrB deoxyribodipyrimidine photo-lyase, at 1,457,920 to 1,460,424
12512
mRNA_4145: 12513 - K00641 metX homoserine O-acetyltransferase, at 1,460,929 to 1,462,648
12513
mRNA_4146: 12514 - Hypothetical Protein, at 1,463,545 to 1,465,730
12514
mRNA_4147: 12515 - HMMPfam-NAD(P)-binding Rossmann-like domain-PF13450,PRINTS-Adrenodoxin reductase family signature-PR00419,SUPERFAMILY--SSF51905, at 1,466,174 to 1,468,597
12515
mRNA_4148: 12516 - K00685 ATE1, ate1 arginine-tRNA-protein transferase, at 1,468,792 to 1,470,729
12516
Group
Condition
mRNA
_4144
mRNA
_4145
mRNA
_4146
mRNA
_4147
mRNA
_4148
12512
12513
12514
12515
12516
auxotrophy
YNB Glucose 75mM Arginine
+0.0
-7.0
-0.4
-0.8
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.7
-5.5
-0.4
+0.1
-0.4
growth on ricinoleic acid
YNB Glucose
-0.9
-5.4
-0.1
-0.1
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.5
-4.2
-0.7
+0.2
-0.4
auxotrophy
YNB Glucose
-0.3
-5.2
-0.2
-0.4
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-5.7
-0.1
+0.2
-0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.6
-5.2
-0.1
-0.5
+0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-1.5
-3.0
-0.5
-1.2
+0.2
growth on oleic acid
YNB Glucose
+0.0
-5.5
+0.3
-0.4
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
-3.5
+0.0
-1.2
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
-5.0
-0.2
+0.0
-0.3
growth on oleic acid
YNB Oleic Acid
-0.2
-3.9
-0.1
-0.7
+0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
-3.5
-0.2
-0.2
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
-2.8
-0.3
+0.3
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.8
-0.0
-0.5
-0.2
auxotrophy
Dropout Complete
+0.2
-0.4
-0.3
-0.4
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
+0.7
+0.1
-1.4
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-1.1
-0.0
+0.1
+0.5
+0.1
growth on ypd
YPD
-0.1
-0.3
+0.2
-0.5
+0.4
ypd buoyancy
40 hrs Median Buoyancy
+0.6
-0.1
+0.2
-0.4
+0.1
ypd buoyancy
40 hrs High Buoyancy
+0.7
-0.2
+0.2
-0.3
+0.1
remove
mRNA_4144
plot
remove
mRNA_4145
plot
remove
mRNA_4146
remove
mRNA_4147
plot
remove
mRNA_4148
plot