Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
12514 and 12515 are separated by 443 nucleotides
12515 and 12516 are separated by 194 nucleotides
12516 and 12517 are separated by 412 nucleotides
12517 and 12518 are separated by 1939 nucleotides
mRNA_4146: 12514 - Hypothetical Protein, at 1,463,545 to 1,465,730
12514
mRNA_4147: 12515 - HMMPfam-NAD(P)-binding Rossmann-like domain-PF13450,PRINTS-Adrenodoxin reductase family signature-PR00419,SUPERFAMILY--SSF51905, at 1,466,174 to 1,468,597
12515
mRNA_4148: 12516 - K00685 ATE1, ate1 arginine-tRNA-protein transferase, at 1,468,792 to 1,470,729
12516
mRNA_4149: 12517 - Hypothetical Protein, at 1,471,142 to 1,472,834
12517
mRNA_4150: 12518 - K15101 SLC25A2_15, ORNT solute carrier family 25 (mitochondrial ornithine transporter) member 2/15, at 1,474,774 to 1,476,217
12518
Group
Condition
mRNA
_4146
mRNA
_4147
mRNA
_4148
mRNA
_4149
mRNA
_4150
12514
12515
12516
12517
12518
facs on lipid accumulation
Sorted High BODIPY Gate
-0.5
-1.2
+0.2
-0.6
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
-1.2
-0.2
-0.6
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
-1.4
-0.3
-0.3
+0.5
auxotrophy
YNB Glucose 75mM Arginine
-0.4
-0.8
-0.4
+0.4
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.2
-0.0
-0.5
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.7
+0.2
-0.4
+0.2
-0.3
growth on oleic acid
YNB Oleic Acid
-0.1
-0.7
+0.0
+0.1
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
+0.1
-0.4
+0.4
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
+0.3
-0.2
+0.6
-1.1
auxotrophy
Dropout Complete
-0.3
-0.4
-0.4
+0.3
+0.1
auxotrophy
YNB Glucose
-0.2
-0.4
-0.5
+0.4
+0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-0.5
-0.2
+0.2
-0.0
ypd buoyancy
40 hrs High Buoyancy
+0.2
-0.3
+0.1
-0.4
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
+0.0
-0.3
+0.5
-0.4
growth on oleic acid
YNB Glucose
+0.3
-0.4
-0.1
+0.2
-0.3
growth on ricinoleic acid
YNB Glucose
-0.1
-0.1
-0.1
+0.4
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
+0.2
-0.5
+0.5
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.5
+0.5
+0.8
-0.6
ypd buoyancy
40 hrs Median Buoyancy
+0.2
-0.4
+0.1
+0.1
+0.3
growth on ypd
YPD
+0.2
-0.5
+0.4
+0.3
+0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.1
+0.5
+0.1
+0.1
-0.0
remove
mRNA_4146
plot
remove
mRNA_4147
plot
remove
mRNA_4148
remove
mRNA_4149
plot
remove
mRNA_4150
plot