Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12518 and 12519 are separated by 219 nucleotides12519 and 12520 are separated by 453 nucleotides12520 and 12521 are separated by 829 nucleotides12521 and 12522 are separated by 399 nucleotides mRNA_4150: 12518 - K15101 SLC25A2_15, ORNT solute carrier family 25 (mitochondrial ornithine transporter) member 2/15, at 1,474,774 to 1,476,217 12518 mRNA_4151: 12519 - ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 1,476,437 to 1,477,857 12519 mRNA_4152: 12520 - K15026 EIF2A translation initiation factor 2A, at 1,478,311 to 1,480,762 12520 mRNA_4153: 12521 - K20347 TMED2, EMP24 p24 family protein beta-1, at 1,481,592 to 1,482,556 12521 mRNA_4154: 12522 - K17402 MRPS23 small subunit ribosomal protein S23, at 1,482,956 to 1,484,034 12522
Group Condition mRNA_4150 mRNA_4151 mRNA_4152 mRNA_4153 mRNA_4154
12518 12519 12520 12521 12522
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 -0.7 N.D. -1.4 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 -0.1 N.D. -1.3 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.1 +0.3 N.D. -0.4 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.3 N.D. -0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.4 N.D. +0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.0 N.D. -0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.3 -0.0 N.D. -0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.4 N.D. +0.4 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.2 N.D. +0.3 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.0 N.D. +0.5 N.D.
auxotrophy YNB Glucose +0.0 -0.2 N.D. +0.3 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.0 +0.0 N.D. +0.2 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 -0.1 N.D. -0.1 N.D.
growth on oleic acid YNB Glucose -0.3 +0.4 N.D. +0.2 N.D.
growth on oleic acid YNB Oleic Acid -0.3 +0.2 N.D. +0.5 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.3 N.D. +1.0 N.D.
growth on ypd YPD +0.2 +0.2 N.D. +0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.1 N.D. +0.9 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 +0.2 N.D. +0.9 N.D.
auxotrophy Dropout Complete +0.1 +0.0 N.D. +0.7 N.D.
growth on ricinoleic acid YNB Glucose -0.2 +0.4 N.D. +0.9 N.D.
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