Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12523 and 12524 are separated by 161 nucleotides12524 and 12525 are separated by 236 nucleotides12525 and 12526 are separated by 177 nucleotides12526 and 12527 are separated by 461 nucleotides mRNA_4155: 12523 - K12492 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1, at 1,484,305 to 1,486,151 12523 mRNA_4156: 12524 - KOG1242 Protein containing adaptin N-terminal region, at 1,486,313 to 1,494,426 12524 mRNA_4157: 12525 - KOG2823 Cellular protein (glioma tumor suppressor candidate region gene 2), at 1,494,663 to 1,496,087 12525 mRNA_4158: 12526 - K11319 ING3 inhibitor of growth protein 3, at 1,496,265 to 1,497,748 12526 mRNA_4159: 12527 - K03002 RPA2, POLR1B DNA-directed RNA polymerase I subunit RPA2, at 1,498,210 to 1,502,276 12527
Group Condition mRNA_4155 mRNA_4156 mRNA_4157 mRNA_4158 mRNA_4159
12523 12524 12525 12526 12527
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -1.7 N.D. N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 -1.4 N.D. N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.6 -0.6 N.D. N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -0.6 N.D. N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.4 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine +0.3 -1.0 N.D. N.D. N.D.
auxotrophy YNB Glucose +0.3 -0.9 N.D. N.D. N.D.
auxotrophy Dropout Complete -0.0 -0.5 N.D. N.D. N.D.
growth on oleic acid YNB Oleic Acid +0.3 -0.8 N.D. N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.3 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 -0.8 N.D. N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.4 -0.1 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.5 N.D. N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.1 N.D. N.D. N.D.
growth on ricinoleic acid YNB Glucose +0.1 -0.4 N.D. N.D. N.D.
growth on oleic acid YNB Glucose +0.4 -0.7 N.D. N.D. N.D.
growth on ypd YPD -0.1 -0.0 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.2 N.D. N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 +0.0 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 +0.4 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 +0.9 N.D. N.D. N.D.
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