Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12524 and 12525 are separated by 236 nucleotides12525 and 12526 are separated by 177 nucleotides12526 and 12527 are separated by 461 nucleotides12527 and 12528 are separated by 184 nucleotides mRNA_4156: 12524 - KOG1242 Protein containing adaptin N-terminal region, at 1,486,313 to 1,494,426 12524 mRNA_4157: 12525 - KOG2823 Cellular protein (glioma tumor suppressor candidate region gene 2), at 1,494,663 to 1,496,087 12525 mRNA_4158: 12526 - K11319 ING3 inhibitor of growth protein 3, at 1,496,265 to 1,497,748 12526 mRNA_4159: 12527 - K03002 RPA2, POLR1B DNA-directed RNA polymerase I subunit RPA2, at 1,498,210 to 1,502,276 12527 mRNA_4160: 12528 - Hypothetical Protein, at 1,502,461 to 1,503,563 12528
Group Condition mRNA_4156 mRNA_4157 mRNA_4158 mRNA_4159 mRNA_4160
12524 12525 12526 12527 12528
growth on ricinoleic acid YNB Ricinoleic Acid -1.7 N.D. N.D. N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -1.4 N.D. N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine -1.0 N.D. N.D. N.D. N.D.
auxotrophy YNB Glucose -0.9 N.D. N.D. N.D. N.D.
growth on oleic acid YNB Oleic Acid -0.8 N.D. N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.8 N.D. N.D. N.D. N.D.
growth on oleic acid YNB Glucose -0.7 N.D. N.D. N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 N.D. N.D. N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.6 N.D. N.D. N.D. N.D.
auxotrophy Dropout Complete -0.5 N.D. N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine -0.5 N.D. N.D. N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.4 N.D. N.D. N.D. N.D.
growth on ricinoleic acid YNB Glucose -0.4 N.D. N.D. N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.3 N.D. N.D. N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 N.D. N.D. N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. N.D. N.D. N.D.
growth on ypd YPD -0.0 N.D. N.D. N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 N.D. N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 N.D. N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 N.D. N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.9 N.D. N.D. N.D. N.D.
remove
mRNA_4156
plot		 remove
mRNA_4157
plot		 remove
mRNA_4158		 remove
mRNA_4159
plot		 remove
mRNA_4160
plot