Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12526 and 12527 are separated by 461 nucleotides12527 and 12528 are separated by 184 nucleotides12528 and 12529 are separated by 299 nucleotides12529 and 12530 are separated by 347 nucleotides mRNA_4158: 12526 - K11319 ING3 inhibitor of growth protein 3, at 1,496,265 to 1,497,748 12526 mRNA_4159: 12527 - K03002 RPA2, POLR1B DNA-directed RNA polymerase I subunit RPA2, at 1,498,210 to 1,502,276 12527 mRNA_4160: 12528 - Hypothetical Protein, at 1,502,461 to 1,503,563 12528 mRNA_4161: 12529 - SUPERFAMILY--SSF52833, at 1,503,863 to 1,504,762 12529 mRNA_4162: 12530 - Hypothetical Protein, at 1,505,110 to 1,508,834 12530
Group Condition mRNA_4158 mRNA_4159 mRNA_4160 mRNA_4161 mRNA_4162
12526 12527 12528 12529 12530
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. N.D. -0.3 -0.9
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. N.D. -0.4 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. N.D. -0.3 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. N.D. -0.3 -0.2
growth on ricinoleic acid YNB Glucose N.D. N.D. N.D. +0.0 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. N.D. -0.0 -0.2
growth on oleic acid YNB Glucose N.D. N.D. N.D. -0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. N.D. -0.2 +0.0
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. N.D. -0.2 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. N.D. -0.1 -0.1
auxotrophy YNB Glucose N.D. N.D. N.D. -0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. N.D. -0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. N.D. -0.0 -0.1
growth on oleic acid YNB Oleic Acid N.D. N.D. N.D. -0.2 +0.1
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. N.D. -0.0 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. N.D. -0.1 +0.0
growth on ypd YPD N.D. N.D. N.D. -0.3 +0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. N.D. +0.1 -0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. N.D. -0.1 +0.3
auxotrophy Dropout Complete N.D. N.D. N.D. +0.0 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. N.D. -0.1 +0.3
remove
mRNA_4158
plot		 remove
mRNA_4159
plot		 remove
mRNA_4160		 remove
mRNA_4161
plot		 remove
mRNA_4162
plot