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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12527 and 12528 are separated by 184 nucleotides
12528 and 12529 are separated by 299 nucleotides
12529 and 12530 are separated by 347 nucleotides
12530 and 12531 are separated by 508 nucleotides
mRNA_4159: 12527 - K03002 RPA2, POLR1B DNA-directed RNA polymerase I subunit RPA2, at 1,498,210 to 1,502,276
12527
mRNA_4160: 12528 - Hypothetical Protein, at 1,502,461 to 1,503,563
12528
mRNA_4161: 12529 - SUPERFAMILY--SSF52833, at 1,503,863 to 1,504,762
12529
mRNA_4162: 12530 - Hypothetical Protein, at 1,505,110 to 1,508,834
12530
mRNA_4163: 12531 - Hypothetical Protein, at 1,509,343 to 1,510,830
12531
Group
Condition
mRNA
_4159
mRNA
_4160
mRNA
_4161
mRNA
_4162
mRNA
_4163
12527
12528
12529
12530
12531
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
N.D.
-0.3
-0.9
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
N.D.
-0.4
-0.4
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
N.D.
-0.3
-0.3
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
N.D.
-0.3
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
N.D.
-0.1
-0.1
-0.4
growth on ricinoleic acid
YNB Glucose
N.D.
N.D.
+0.0
-0.4
+0.0
auxotrophy
YNB Glucose
N.D.
N.D.
-0.1
-0.1
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
N.D.
-0.1
+0.3
-0.4
ypd buoyancy
40 hrs Low Buoyancy
N.D.
N.D.
-0.2
-0.0
-0.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
N.D.
-0.2
+0.0
-0.0
ypd buoyancy
40 hrs Median Buoyancy
N.D.
N.D.
-0.1
-0.1
+0.0
growth on oleic acid
YNB Glucose
N.D.
N.D.
-0.1
-0.2
+0.1
growth on ypd
YPD
N.D.
N.D.
-0.3
+0.2
-0.1
ypd buoyancy
40 hrs High Buoyancy
N.D.
N.D.
-0.0
-0.1
+0.0
auxotrophy
YNB Glucose 75mM Arginine
N.D.
N.D.
-0.0
-0.0
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
N.D.
+0.1
-0.1
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
N.D.
-0.0
-0.2
+0.3
growth on oleic acid
YNB Oleic Acid
N.D.
N.D.
-0.2
+0.1
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
N.D.
-0.1
+0.0
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
N.D.
-0.1
+0.3
-0.1
auxotrophy
Dropout Complete
N.D.
N.D.
+0.0
+0.1
+0.0
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