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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12529 and 12530 are separated by 347 nucleotides
12530 and 12531 are separated by 508 nucleotides
12531 and 12532 are separated by 669 nucleotides
12532 and 12533 are separated by 293 nucleotides
mRNA_4161: 12529 - SUPERFAMILY--SSF52833, at 1,503,863 to 1,504,762
12529
mRNA_4162: 12530 - Hypothetical Protein, at 1,505,110 to 1,508,834
12530
mRNA_4163: 12531 - Hypothetical Protein, at 1,509,343 to 1,510,830
12531
mRNA_4164: 12532 - K02021 ABC.MR putative ABC transport system ATP-binding protein, at 1,511,500 to 1,513,697
12532
mRNA_4165: 12533 - Hypothetical Protein, at 1,513,991 to 1,515,479
12533
Group
Condition
mRNA
_4161
mRNA
_4162
mRNA
_4163
mRNA
_4164
mRNA
_4165
12529
12530
12531
12532
12533
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-0.9
-0.5
-0.6
+0.8
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
-0.2
-0.2
-0.5
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
-0.3
-0.2
-0.2
-0.0
growth on ricinoleic acid
YNB Glucose
+0.0
-0.4
+0.0
-0.6
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
-0.4
-0.1
-0.0
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
+0.0
+0.1
-0.7
+0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.2
+0.0
-0.0
-0.2
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.1
-0.4
+0.2
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.0
-0.0
+0.0
-0.4
+0.0
growth on oleic acid
YNB Glucose
-0.1
-0.2
+0.1
-0.2
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.0
-0.1
-0.4
+0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
+0.3
-0.4
-0.1
+0.1
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.1
+0.0
-0.3
+0.0
auxotrophy
YNB Glucose
-0.1
-0.1
-0.2
-0.0
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
-0.1
-0.0
-0.4
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
-0.2
+0.3
-0.7
+0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
+0.3
-0.1
-0.2
+0.0
growth on oleic acid
YNB Oleic Acid
-0.2
+0.1
+0.1
-0.4
+0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.1
+0.0
-0.0
+0.1
growth on ypd
YPD
-0.3
+0.2
-0.1
+0.0
+0.2
auxotrophy
Dropout Complete
+0.0
+0.1
+0.0
-0.1
-0.0
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