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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12531 and 12532 are separated by 669 nucleotides
12532 and 12533 are separated by 293 nucleotides
12533 and 12534 are separated by 398 nucleotides
12534 and 12535 are separated by 516 nucleotides
mRNA_4163: 12531 - Hypothetical Protein, at 1,509,343 to 1,510,830
12531
mRNA_4164: 12532 - K02021 ABC.MR putative ABC transport system ATP-binding protein, at 1,511,500 to 1,513,697
12532
mRNA_4165: 12533 - Hypothetical Protein, at 1,513,991 to 1,515,479
12533
mRNA_4166: 12534 - K12597 AIR1_2 protein AIR1/2, at 1,515,878 to 1,517,607
12534
mRNA_4167: 12535 - Hypothetical Protein, at 1,518,124 to 1,518,875
12535
Group
Condition
mRNA
_4163
mRNA
_4164
mRNA
_4165
mRNA
_4166
mRNA
_4167
12531
12532
12533
12534
12535
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.5
+0.1
-0.6
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
-0.4
+0.2
-0.5
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
-0.1
+0.1
-0.2
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.2
+0.0
-0.6
-0.1
growth on ricinoleic acid
YNB Glucose
+0.0
-0.6
-0.1
+0.1
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
+0.2
-0.1
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.0
+0.1
-0.5
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
-0.7
+0.0
+0.1
-0.0
growth on ypd
YPD
-0.1
+0.0
+0.2
-0.4
-0.2
auxotrophy
Dropout Complete
+0.0
-0.1
-0.0
+0.0
-0.4
auxotrophy
YNB Glucose 75mM Arginine
+0.0
-0.4
+0.0
+0.2
-0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-0.2
+0.0
+0.1
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.2
-0.0
+0.2
-0.0
growth on oleic acid
YNB Glucose
+0.1
-0.2
-0.1
-0.0
+0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.4
+0.4
-0.0
+0.1
auxotrophy
YNB Glucose
-0.2
-0.0
+0.1
+0.2
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
-0.6
+0.8
+0.3
+0.0
ypd buoyancy
40 hrs High Buoyancy
+0.0
-0.3
+0.0
+0.3
-0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.0
-0.0
+0.1
+0.0
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
-0.7
+0.5
+0.1
+0.2
growth on oleic acid
YNB Oleic Acid
+0.1
-0.4
+0.3
+0.2
+0.4
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