Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
12534 and 12535 are separated by 516 nucleotides
12535 and 12536 are separated by 411 nucleotides
12536 and 12537 are separated by 647 nucleotides
12537 and 12538 are separated by 1245 nucleotides
mRNA_4166: 12534 - K12597 AIR1_2 protein AIR1/2, at 1,515,878 to 1,517,607
12534
mRNA_4167: 12535 - Hypothetical Protein, at 1,518,124 to 1,518,875
12535
mRNA_4168: 12536 - K09487 HSP90B, TRA1 heat shock protein 90kDa beta, at 1,519,287 to 1,521,954
12536
mRNA_4169: 12537 - K13299 GSTK1 glutathione S-transferase kappa 1, at 1,522,602 to 1,523,728
12537
mRNA_4170: 12538 - KOG1256 Long-chain acyl-CoA synthetases (AMP-forming), at 1,524,974 to 1,527,080
12538
Group
Condition
mRNA
_4166
mRNA
_4167
mRNA
_4168
mRNA
_4169
mRNA
_4170
12534
12535
12536
12537
12538
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.6
-0.3
-0.1
+0.2
-0.3
growth on oleic acid
YNB Glucose
-0.0
+0.0
-0.0
-0.7
-0.1
growth on ypd
YPD
-0.4
-0.2
+0.3
-0.4
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.5
-0.1
+0.0
+0.1
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.6
-0.1
+0.1
+0.3
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.2
-0.0
+0.3
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-0.3
+0.0
+0.1
+0.1
auxotrophy
Dropout Complete
+0.0
-0.4
+0.1
-0.0
+0.0
auxotrophy
YNB Glucose 75mM Methionine
+0.1
-0.3
+0.1
-0.3
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.5
-0.4
+0.0
+0.7
+0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.0
+0.1
+0.0
-0.3
+0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.2
-0.3
+0.0
-0.2
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.0
-0.0
+0.1
-0.3
+0.0
growth on ricinoleic acid
YNB Glucose
+0.1
-0.2
+0.1
-0.1
+0.0
auxotrophy
YNB Glucose
+0.2
-0.1
+0.1
-0.1
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
+0.0
+0.1
-0.1
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
-0.0
+0.4
-0.3
-0.0
ypd buoyancy
40 hrs High Buoyancy
+0.3
-0.0
+0.1
-0.1
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+0.2
+0.3
-0.4
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
-0.0
+0.3
+0.1
-0.1
growth on oleic acid
YNB Oleic Acid
+0.2
+0.4
+0.2
-0.2
+0.1
remove
mRNA_4166
plot
remove
mRNA_4167
plot
remove
mRNA_4168
remove
mRNA_4169
plot
remove
mRNA_4170
plot