Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12535 and 12536 are separated by 411 nucleotides12536 and 12537 are separated by 647 nucleotides12537 and 12538 are separated by 1245 nucleotides12538 and 12539 are separated by 933 nucleotides mRNA_4167: 12535 - Hypothetical Protein, at 1,518,124 to 1,518,875 12535 mRNA_4168: 12536 - K09487 HSP90B, TRA1 heat shock protein 90kDa beta, at 1,519,287 to 1,521,954 12536 mRNA_4169: 12537 - K13299 GSTK1 glutathione S-transferase kappa 1, at 1,522,602 to 1,523,728 12537 mRNA_4170: 12538 - KOG1256 Long-chain acyl-CoA synthetases (AMP-forming), at 1,524,974 to 1,527,080 12538 mRNA_4171: 12539 - KOG2806 Chitinase, at 1,528,014 to 1,529,581 12539
Group Condition mRNA_4167 mRNA_4168 mRNA_4169 mRNA_4170 mRNA_4171
12535 12536 12537 12538 12539
growth on oleic acid YNB Glucose +0.0 -0.0 -0.7 -0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.3 +0.0 -0.2 +0.1 -0.5
auxotrophy Dropout Complete -0.4 +0.1 -0.0 +0.0 -0.5
auxotrophy YNB Glucose -0.1 +0.1 -0.1 +0.1 -0.6
auxotrophy YNB Glucose 75mM Methionine -0.3 +0.1 -0.3 +0.1 -0.4
growth on ricinoleic acid YNB Glucose -0.2 +0.1 -0.1 +0.0 -0.6
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.0 -0.3 +0.0 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.1 +0.2 -0.3 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 +0.4 -0.3 -0.0 -0.6
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 +0.1 -0.1 -0.3 -0.2
growth on ypd YPD -0.2 +0.3 -0.4 +0.1 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.1 -0.1 +0.0 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.1 -0.3 +0.0 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 +0.3 +0.1 -0.1 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.0 +0.1 -0.1 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 +0.3 -0.4 +0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.0 +0.3 -0.2 +0.4
growth on oleic acid YNB Oleic Acid +0.4 +0.2 -0.2 +0.1 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.3 +0.0 +0.1 +0.1 +0.9
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.1 +0.3 -0.0 +0.6
facs on lipid accumulation Sorted No BODIPY Gate -0.4 +0.0 +0.7 +0.0 +0.7
remove
mRNA_4167
plot
remove
mRNA_4168
plot
remove
mRNA_4169
remove
mRNA_4170
plot
remove
mRNA_4171
plot