Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12536 and 12537 are separated by 647 nucleotides12537 and 12538 are separated by 1245 nucleotides12538 and 12539 are separated by 933 nucleotides12539 and 12540 are separated by 561 nucleotides mRNA_4168: 12536 - K09487 HSP90B, TRA1 heat shock protein 90kDa beta, at 1,519,287 to 1,521,954 12536 mRNA_4169: 12537 - K13299 GSTK1 glutathione S-transferase kappa 1, at 1,522,602 to 1,523,728 12537 mRNA_4170: 12538 - KOG1256 Long-chain acyl-CoA synthetases (AMP-forming), at 1,524,974 to 1,527,080 12538 mRNA_4171: 12539 - KOG2806 Chitinase, at 1,528,014 to 1,529,581 12539 mRNA_4172: 12540 - KOG1212 Amidases, at 1,530,143 to 1,531,631 12540
Group Condition mRNA_4168 mRNA_4169 mRNA_4170 mRNA_4171 mRNA_4172
12536 12537 12538 12539 12540
growth on oleic acid YNB Glucose -0.0 -0.7 -0.1 -0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.3 +0.0 -0.5 N.D.
auxotrophy YNB Glucose +0.1 -0.1 +0.1 -0.6 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 -0.3 -0.0 -0.6 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.0 -0.2 +0.1 -0.5 N.D.
growth on ricinoleic acid YNB Glucose +0.1 -0.1 +0.0 -0.6 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.3 +0.1 -0.4 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.1 -0.3 -0.2 N.D.
auxotrophy Dropout Complete +0.1 -0.0 +0.0 -0.5 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.2 -0.3 -0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.1 +0.0 -0.2 N.D.
growth on ypd YPD +0.3 -0.4 +0.1 -0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.3 +0.0 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 +0.1 -0.1 -0.4 N.D.
growth on oleic acid YNB Oleic Acid +0.2 -0.2 +0.1 -0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 -0.4 +0.2 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.1 -0.1 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 +0.3 -0.2 +0.4 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.3 -0.0 +0.6 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.0 +0.1 +0.1 +0.9 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.0 +0.7 +0.0 +0.7 N.D.
remove
mRNA_4168
plot
remove
mRNA_4169
plot
remove
mRNA_4170
remove
mRNA_4171
plot
remove
mRNA_4172
plot